PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026412715.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 542aa MW: 60240.2 Da PI: 6.9017

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026412715.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.7	1.3e-18	65	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+ + g++Wk+Ia+ ++ +Rt+ qc +rwqk+l XP_026412715.1 65 KGGWTPEEDEKLRKAVESFKGKNWKKIAASLP-HRTEVQCLHRWQKVL 111 688***************************.**********986 PP
2	Myb_DNA-binding	58.6	1.4e-18	117	163	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd+++ ++v ++G+ W++Ia++++ gR +kqc++rw+++l XP_026412715.1 117 KGPWTLEEDDKIMELVSKYGPSKWSLIAKELP-GRIGKQCRERWHNHL 163 79****************************.***********97 PP
3	Myb_DNA-binding	45.7	1.5e-14	169	212	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r++WT eE+ l +a++++G++ W+ Ia+ ++ gRt++ +k+ w++ XP_026412715.1 169 RDAWTVEEEVALMNAHRLYGNK-WAEIAKVLP-GRTDNAIKNLWNS 212 789*****************.*****.*******9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MDDDAEMMVD VDVEVRCLEN KQETPNSSSS VSDEDEEDLN CSGSSLSVRS ASSNRRISGP 60 IRRAKGGWTP EEDEKLRKAV ESFKGKNWKK IAASLPHRTE VQCLHRWQKV LHPDLVKGPW 120 TLEEDDKIME LVSKYGPSKW SLIAKELPGR IGKQCRERWH NHLNPEIKRD AWTVEEEVAL 180 MNAHRLYGNK WAEIAKVLPG RTDNAIKNLW NSSLKKKLDF YLSSGQLPPL GPVLKTEDYA 240 LAMSRSPAAG NSIVCLDEGF NTGTQSSLEK DDSHKLGEGT MVLVQPSTPE FLDRDVPTGV 300 QAIKSSNSDD IEGKQLASEN YYSCSKSFST PNSVDYRSNA VADPEKNIAA TTLPMAVPVS 360 SSSLFEMSDS NSVLSPSSFL TPPRIRNNGL DVQSAESILK NAAKSFQNTP SILRKRKREA 420 GGTPNMIRQT NGLTDEDKSH SLEREKIENC KETPGSLESN SSTGRVNSTI RLFYTRKKHR 480 PYRSRVERPD ACKSLEKQLD STLDGVRTDN SQSESMKSAS EHQGKSTNKE DGHDPLQNSV 540 AS

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MDDDAEMMVD VDVEVRCLEN KQETPNSSSS VSDEDEEDLN CSGSSLSVRS ASSNRRISGP  60
IRRAKGGWTP EEDEKLRKAV ESFKGKNWKK IAASLPHRTE VQCLHRWQKV LHPDLVKGPW  120
TLEEDDKIME LVSKYGPSKW SLIAKELPGR IGKQCRERWH NHLNPEIKRD AWTVEEEVAL  180
MNAHRLYGNK WAEIAKVLPG RTDNAIKNLW NSSLKKKLDF YLSSGQLPPL GPVLKTEDYA  240
LAMSRSPAAG NSIVCLDEGF NTGTQSSLEK DDSHKLGEGT MVLVQPSTPE FLDRDVPTGV  300
QAIKSSNSDD IEGKQLASEN YYSCSKSFST PNSVDYRSNA VADPEKNIAA TTLPMAVPVS  360
SSSLFEMSDS NSVLSPSSFL TPPRIRNNGL DVQSAESILK NAAKSFQNTP SILRKRKREA  420
GGTPNMIRQT NGLTDEDKSH SLEREKIENC KETPGSLESN SSTGRVNSTI RLFYTRKKHR  480
PYRSRVERPD ACKSLEKQLD STLDGVRTDN SQSESMKSAS EHQGKSTNKE DGHDPLQNSV  540
AS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09370.1	1e-104	MYB family protein