PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026412503.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 449aa MW: 49351.7 Da PI: 6.8217

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026412503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.5	7.5e-19	58	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g W++eEdell ++v++lG ++W++I++ ++ gR++k+c++rw + XP_026412503.1 58 KGTWSPEEDELLTQLVAKLGARNWNLISAGIP-GRSGKSCRLRWCNQ 103 799***************************.*********985 PP
2	Myb_DNA-binding	58.8	1.2e-18	110	154	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T+ Edel++da++ +G++ W++Iar ++ gRt++ +k++w++ XP_026412503.1 110 RKPFTEKEDELIIDAHAVHGNR-WAAIARLLP-GRTDNAIKNHWNST 154 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MKEDEKVGLQ RGGGGGQDSS GGGGGETLEV KDEMNHNNNN GIIRTRSTSS VVRKSRVKGT 60 WSPEEDELLT QLVAKLGARN WNLISAGIPG RSGKSCRLRW CNQLDPYLKR KPFTEKEDEL 120 IIDAHAVHGN RWAAIARLLP GRTDNAIKNH WNSTLRRRCL EFDPPKGTKA AAVLAAVAAS 180 LEMMGGNPMN LDKTKVLSET TLSCQPDVYR EADVNMGDNA VNLDKTKVLS ETTLSCEPDV 240 NRQPDVNMGD NAMNLDKTKV LLESTEPDMN CEPVAKRNDV VDSLENQSNQ HQDREENHRV 300 EYHCRNEPKE KLTLFRPAPR VSAFNLYNEQ SMGGCVLPTM VPMLHGPLLQ PCKPPVVGQC 360 GLLGGIRRVP SHCGHGCCTG SRSVGYDGRS SLLGPEFVEF VEPPPFSGHE LVSIATELSN 420 VAWLKSGLGF GFDHRGIVKD NAEQQVIYH

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MKEDEKVGLQ RGGGGGQDSS GGGGGETLEV KDEMNHNNNN GIIRTRSTSS VVRKSRVKGT  60
WSPEEDELLT QLVAKLGARN WNLISAGIPG RSGKSCRLRW CNQLDPYLKR KPFTEKEDEL  120
IIDAHAVHGN RWAAIARLLP GRTDNAIKNH WNSTLRRRCL EFDPPKGTKA AAVLAAVAAS  180
LEMMGGNPMN LDKTKVLSET TLSCQPDVYR EADVNMGDNA VNLDKTKVLS ETTLSCEPDV  240
NRQPDVNMGD NAMNLDKTKV LLESTEPDMN CEPVAKRNDV VDSLENQSNQ HQDREENHRV  300
EYHCRNEPKE KLTLFRPAPR VSAFNLYNEQ SMGGCVLPTM VPMLHGPLLQ PCKPPVVGQC  360
GLLGGIRRVP SHCGHGCCTG SRSVGYDGRS SLLGPEFVEF VEPPPFSGHE LVSIATELSN  420
VAWLKSGLGF GFDHRGIVKD NAEQQVIYH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	3e-51	MYB family protein