PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026412298.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 275aa MW: 30713 Da PI: 10.3979

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026412298.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	62.1	9.4e-20	131	221	2	98
EEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 +k +++s+v + +l +p++f++++ g e++ ++led +g +++v + ++ ++ l++GWk F++a++L++gD ++F+l+ + ++l+v+ XP_026412298.1 131 VKSMLQSHVYNGFWLNVPRDFCKKYlPG---EKTVVVLEDAKGAEFDVVY--TGEKENAGLSGGWKAFAEAHKLDDGDALIFELT--EPARLKVH 218 6999*******************633...4458***********..99999999********************85..6888999 PP EE- CS B3 96 vfr 98 +f+ XP_026412298.1 219 IFK 221 997 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MADANFYEEA RKQRMEENLR RFQDLGVAKI AKSLTDQATK PKPKAIAKPR APAPVDPNLV 60 RRSSRPHTTV TSYAEEFIED RPARKKPRSG FSTRVKKPHE KVATEAQRAK VIKHAEDYRV 120 RHVPSANPSY VKSMLQSHVY NGFWLNVPRD FCKKYLPGEK TVVVLEDAKG AEFDVVYTGE 180 KENAGLSGGW KAFAEAHKLD DGDALIFELT EPARLKVHIF KGIGTGDEGL LKGKKKAKGG 240 KGKKSDAKED MVEAAAENTT QPRERKTRNS KKAGE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	85	96	KKPRSGFSTRVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	1e-41	B3 family protein