PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026410755.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 588aa MW: 66591.8 Da PI: 10.1468

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026410755.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.4	5.7e-07	11	46	2	38
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlk 38 ++W t+E++ll av ++G++ W+++a+++ Rt + XP_026410755.1 11 MNWGTWEELLLGGAVIRHGTRAWDAVASELR-SRTIY 46 68****************************.9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 588 aa Download sequence
MMKETEMIMM MNWGTWEELL LGGAVIRHGT RAWDAVASEL RSRTIYPFSF TPEVCKAKYR 60 DLRKRYCGCK TWFEELRKQR VAELKRELVK SDDSIGSLET KIESLKAEKV EDQHQDNDNI 120 HMVRYDPSPI VSPDSNGSTE RIGFHRKETS NNSKDGLSAS SFTEETRTNW SRVCQVPTAT 180 VSNQEKENLI DTDPEDAKVN PENMRNVEEV CADIPISNLR KRRGKRKRKD CSSIELKKEA 240 SVGENGESDV LSTAEVAMNG PDFDDQSAKL SDRVDQTVVV KGGEKLDLMK IFESFMENEH 300 ASMFCSRLDS QKRARYKNTI RRHMDFNTIR AGISNGSIKS TRELYRDILL LTNNAINFYS 360 KNTRQYTFAI SLRNLAKNTF QQIQCVSCLD SGGDSIGGGG DRISCEAQQF SLPVKPRSIR 420 PRIRKVIGKL VTEERMSPKK DGKKSQPEVE DMLFPTRETK KGKAETTEEV STLKKDTKKG 480 QTEMGEKVTL KLTKKRKTEA EEIIAQKPVN KNSKTEVPKQ MIPSRKETKK GSSDAKILVE 540 SPLVALEVVK KTGAGRSKKV GRGNGGGQKP KRVDTDAVVK ERKRTRRR

Sequence ? help Back to Top

Protein Sequence Length: 588 aa Download sequence

MMKETEMIMM MNWGTWEELL LGGAVIRHGT RAWDAVASEL RSRTIYPFSF TPEVCKAKYR  60
DLRKRYCGCK TWFEELRKQR VAELKRELVK SDDSIGSLET KIESLKAEKV EDQHQDNDNI  120
HMVRYDPSPI VSPDSNGSTE RIGFHRKETS NNSKDGLSAS SFTEETRTNW SRVCQVPTAT  180
VSNQEKENLI DTDPEDAKVN PENMRNVEEV CADIPISNLR KRRGKRKRKD CSSIELKKEA  240
SVGENGESDV LSTAEVAMNG PDFDDQSAKL SDRVDQTVVV KGGEKLDLMK IFESFMENEH  300
ASMFCSRLDS QKRARYKNTI RRHMDFNTIR AGISNGSIKS TRELYRDILL LTNNAINFYS  360
KNTRQYTFAI SLRNLAKNTF QQIQCVSCLD SGGDSIGGGG DRISCEAQQF SLPVKPRSIR  420
PRIRKVIGKL VTEERMSPKK DGKKSQPEVE DMLFPTRETK KGKAETTEEV STLKKDTKKG  480
QTEMGEKVTL KLTKKRKTEA EEIIAQKPVN KNSKTEVPKQ MIPSRKETKK GSSDAKILVE  540
SPLVALEVVK KTGAGRSKKV GRGNGGGQKP KRVDTDAVVK ERKRTRRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	220	230	RKRRGKRKRKD
2	222	232	RKRRGKRKRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42150.1	9e-36	MYB_related family protein