PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026410572.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 299aa    MW: 34086.9 Da    PI: 7.5122
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026410572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.84.5e-07241285345
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 
                      +WT  Ed  l++a k ++++   +W++Ia  ++ g++   c  r  
   XP_026410572.1 241 NWTSAEDVALLNALKAFPKDvamRWEKIAVAVP-GKSKAVCMKRAK 285
                      8********************************.***999998865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MEFLDEESRP SRFMFQSKAS TKSEPENFKV NKTLAVSCII VSIILIITSI FVFESETLKF  60
IVFWFSLSLI VGPFAPNSIT AGDIRVGQGQ ILEPLNEEDE ADQIGDKRRG RKQHQTVKKN  120
EDLRDVNAKS SEKLKMNTNT TDVVYEEKEW VEEDFEILKK QILKHPVGEP KRWELITEAF  180
QGRHGLESVI KMGKSLSERK IGNGDSFSQF LKQRKPLDKR LVEESNGDFE LINDDKKENP  240
NWTSAEDVAL LNALKAFPKD VAMRWEKIAV AVPGKSKAVC MKRAKELKND FRSSKTSGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.12e-73MYB_related family protein