PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026409646.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 161aa MW: 18887.6 Da PI: 9.4985 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.2 | 1.4e-16 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd+ll ++++++G g W+ ++ + g++R++k+c++rw++yl XP_026409646.1 17 KGTWSKEEDQLLRRCIEKFGEGKWSQVPLKAGLNRCGKSCRLRWLDYL 64 799******************************************997 PP | |||||||
2 | Myb_DNA-binding | 46.4 | 8.8e-15 | 70 | 115 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l+++ +k+lG++ W++Ia +++ gRt++++k++++++l XP_026409646.1 70 RGDFEPDELDLIIRMHKLLGNR-WSLIAGRLP-GRTANDIKNYYNTHL 115 78999*****************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MGSSSSIVFS EMRGLRKGTW SKEEDQLLRR CIEKFGEGKW SQVPLKAGLN RCGKSCRLRW 60 LDYLQPNIKR GDFEPDELDL IIRMHKLLGN RWSLIAGRLP GRTANDIKNY YNTHLKKNSF 120 FKYDTDQEEQ VVVIEKLDNN INDHCPRFKN VNADFFWTSI T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 4e-58 | MYB family protein |