PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026408777.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 1024aa MW: 112482 Da PI: 5.1612

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026408777.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.6	2.4e-17	47	93	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_026408777.1 47 KGQWTAEEDTILCRAVQRFKGRNWKKIAECFK-DRTDVQCLHRWQKVL 93 799**************************9.**********986 PP
2	Myb_DNA-binding	62	1.2e-19	99	145	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde +v++vk++G + W+tIa+ ++ gR +kqc++rw+++l XP_026408777.1 99 KGPWSKEEDEVIVELVKKHGAKKWSTIAQALP-GRIGKQCRERWHNHL 145 79****************************.***********97 PP
3	Myb_DNA-binding	46.8	6.8e-15	151	193	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE+ l++a++ +G++ W+ + ++ gRt++++k++w+ XP_026408777.1 151 KEAWTQEEEVALIHAHQIYGNK-WAELTKFLP-GRTDNMIKNHWN 193 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1024 aa Download sequence
MESDRNPGDG GAEVHVAAPL EGGNQNGLQR TRTSHGRTSG PTRRSTKGQW TAEEDTILCR 60 AVQRFKGRNW KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEVI VELVKKHGAK 120 KWSTIAQALP GRIGKQCRER WHNHLNPNIN KEAWTQEEEV ALIHAHQIYG NKWAELTKFL 180 PGRTDNMIKN HWNSSVKKKL DSYLASGLLA QFQGLPHVGN LNQYPPSSSR AQNSGRDDSC 240 LKDGSEMEEV SECSQPSTAH ACSQTDNNMD NSYIPVHSQD DFRLTEEFGH IESQTSNPSC 300 SQQYYTTLEE VACAGREIPC GQATSVKSPA HNFMCHSGNS DYFLQEPSAF FEPSRPCTTG 360 AKEDLETGSL MSGGSSMEHN VVRADNQEQA SMSQTDRSGV FNSEEGTNGC FSSVNGHSNA 420 MICRSDSQSS ETGRSLAPQP YYPLSSSDML STYCGEPLMN YSSLLCAGEG TVSFGNKCSG 480 MRDMPSGIQD PEAFTSSCDG FIYPEAGCSN SPCDDDIEKD CLPSNPNWVK DASKPVPVDI 540 FASLNLDGVE THTSVDKGRK NDVEDPDQGT LFYEPPRFPS LDLPFLSCDL IQSGGDLQQA 600 YSPLGIRQLT MSSMNCYSPY RLFDSPSRDD SPDGVLKSAA KSFQGTPSIL KKRPREFFSP 660 LQDRKCGKKH DGKIMNSSES PGLDVVFDEN VVGNITLSAI KSVLFSPPNN HRYHLGVSTS 720 DKENVDHGGI SSSDGRILEN VSETGPRRNQ EADDGLVASD TMDLGDTTEM VQQPSRVLVE 780 HNINDRVFFS PDRERYPTNR VFNAQSPKDQ HSRSLETSSA QNAQSGRSEH CSVNVFVSPT 840 SERRNGRRLV PATSAQCFPL SLPLEVASKN AGIDGDTENI SLFGGTPSIK KGFESPSAWK 900 SPWFMNSFLP GPRVDTDITI EDIGYFMSPG ERSYDALGLM QQLREQTAAV VAEAHEVLAS 960 GQKDPPDGKL CDQEDSGNEL LTERRVLDFS ECGTPGKGTE NRRSAGATSV SFSSPSSYLM 1020 KGCR

Sequence ? help Back to Top

Protein Sequence Length: 1024 aa Download sequence

MESDRNPGDG GAEVHVAAPL EGGNQNGLQR TRTSHGRTSG PTRRSTKGQW TAEEDTILCR  60
AVQRFKGRNW KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEVI VELVKKHGAK  120
KWSTIAQALP GRIGKQCRER WHNHLNPNIN KEAWTQEEEV ALIHAHQIYG NKWAELTKFL  180
PGRTDNMIKN HWNSSVKKKL DSYLASGLLA QFQGLPHVGN LNQYPPSSSR AQNSGRDDSC  240
LKDGSEMEEV SECSQPSTAH ACSQTDNNMD NSYIPVHSQD DFRLTEEFGH IESQTSNPSC  300
SQQYYTTLEE VACAGREIPC GQATSVKSPA HNFMCHSGNS DYFLQEPSAF FEPSRPCTTG  360
AKEDLETGSL MSGGSSMEHN VVRADNQEQA SMSQTDRSGV FNSEEGTNGC FSSVNGHSNA  420
MICRSDSQSS ETGRSLAPQP YYPLSSSDML STYCGEPLMN YSSLLCAGEG TVSFGNKCSG  480
MRDMPSGIQD PEAFTSSCDG FIYPEAGCSN SPCDDDIEKD CLPSNPNWVK DASKPVPVDI  540
FASLNLDGVE THTSVDKGRK NDVEDPDQGT LFYEPPRFPS LDLPFLSCDL IQSGGDLQQA  600
YSPLGIRQLT MSSMNCYSPY RLFDSPSRDD SPDGVLKSAA KSFQGTPSIL KKRPREFFSP  660
LQDRKCGKKH DGKIMNSSES PGLDVVFDEN VVGNITLSAI KSVLFSPPNN HRYHLGVSTS  720
DKENVDHGGI SSSDGRILEN VSETGPRRNQ EADDGLVASD TMDLGDTTEM VQQPSRVLVE  780
HNINDRVFFS PDRERYPTNR VFNAQSPKDQ HSRSLETSSA QNAQSGRSEH CSVNVFVSPT  840
SERRNGRRLV PATSAQCFPL SLPLEVASKN AGIDGDTENI SLFGGTPSIK KGFESPSAWK  900
SPWFMNSFLP GPRVDTDITI EDIGYFMSPG ERSYDALGLM QQLREQTAAV VAEAHEVLAS  960
GQKDPPDGKL CDQEDSGNEL LTERRVLDFS ECGTPGKGTE NRRSAGATSV SFSSPSSYLM  1020
KGCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11510.1	1e-178	MYB family protein