PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026408259.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 284aa MW: 30552 Da PI: 7.3922

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026408259.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.1	1.8e-12	10	54	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT eE++ + +a+ + + +W++Ia+ ++ gRt++++k+++ XP_026408259.1 10 TWTREEEKAFEKAIISNPEDsidRWEKIAEALP-GRTAEEIKNHYE 54 7******************************.********96 PP
2	Myb_DNA-binding	40.5	6.4e-13	122	166	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++G+g+W++I+r + Rt+ q+ s+ qky XP_026408259.1 122 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKY 166 6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MDENMNSCST WTREEEKAFE KAIISNPEDS IDRWEKIAEA LPGRTAEEIK NHYELLVEDV 60 NNIEAGLVTL PNYISASEGS TEHASEGGTS KKGGIHLAHF QSESNHGSKS SRADQERRKG 120 IAWTEDEHRL FLLGLDKYGK GDWRSISRNF VVSRTPTQVA SHAQKYFIRL NSMNKDRRRS 180 SIHDITSVGS GDVSSPQGPI TGQTNGAAPG GGSSSKSTKP QAQPSSGAPA VGVYGAPTIG 240 QPVGGPLIPA VGTPVNLSAP PHMAYGIRAP VPSMPPMTYP MPHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-108	MYB family protein