PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026408255.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 290aa MW: 31217.9 Da PI: 7.8753

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026408255.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39	1.8e-12	16	60	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT eE++ + +a+ + + +W++Ia+ ++ gRt++++k+++ XP_026408255.1 16 TWTREEEKAFEKAIISNPEDsidRWEKIAEALP-GRTAEEIKNHYE 60 7******************************.********96 PP
2	Myb_DNA-binding	40.4	6.6e-13	128	172	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++G+g+W++I+r + Rt+ q+ s+ qky XP_026408255.1 128 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKY 172 6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MGLLLLRDEN MNSCSTWTRE EEKAFEKAII SNPEDSIDRW EKIAEALPGR TAEEIKNHYE 60 LLVEDVNNIE AGLVTLPNYI SASEGSTEHA SEGGTSKKGG IHLAHFQSES NHGSKSSRAD 120 QERRKGIAWT EDEHRLFLLG LDKYGKGDWR SISRNFVVSR TPTQVASHAQ KYFIRLNSMN 180 KDRRRSSIHD ITSVGSGDVS SPQGPITGQT NGAAPGGGSS SKSTKPQAQP SSGAPAVGVY 240 GAPTIGQPVG GPLIPAVGTP VNLSAPPHMA YGIRAPVPSM PPMTYPMPHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-108	MYB family protein