PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026408007.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 593aa MW: 65433.4 Da PI: 6.6142

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026408007.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.2	2.3e-30	328	386	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a Cpv+k+v+r+aed +++++tYeg+Hnh+ XP_026408007.1 328 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaACPVRKQVQRCAEDRTILITTYEGTHNHP 386 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MNRLAGGEIA YNSDPFRNFF PSKPPSFMDT TATNFHGSGF TMNLINSNDH HQQHEKRAVV 60 DEMDFFSSDK NRVREYDQNK GAKDMMIKKE DSHGGSSSRF SHDVNTGLNL LTANTLSDQS 120 TVDDDGISPN ADDKRSKNEL EALQQDLNRM NSENQKLKGM LSQVTNNYNT LQMQLVVLMQ 180 QKSPKIETSQ DHEMVNVAKH EENRVNEMIP RQFMDLGLAT TNTEVDELSH SSSEGKSRDR 240 SRTPINTSLE ESSLQKKEMV LFDHQEKSEL GSSRDNEESL EDHPSQGWVP NKIPKLNVES 300 QQQQQPMEAT MRKPRVSVRA RSEAPMITDG CQWRKYGQKM AKGNPCPRAY YRCTMAAACP 360 VRKQVQRCAE DRTILITTYE GTHNHPLPPA AMAMASTTST AATMLLSGSM SSADGLMNSN 420 FLTRTLLPCS SSMATISASA PFPTVTLDLT QSPNNPLQFQ RPTTQFHVPF MNQSPSQGFG 480 SQPTAQPQLP QLFGQSPYNQ SKFSGLQMSS QNGDQAHRSN NHQSPPRQQQ QQAQPNSLAD 540 TVSAATAAIT ADPNFTAALA AAISSIMSGG GQQTMNNNSS SCNTASNTNN STD

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MNRLAGGEIA YNSDPFRNFF PSKPPSFMDT TATNFHGSGF TMNLINSNDH HQQHEKRAVV  60
DEMDFFSSDK NRVREYDQNK GAKDMMIKKE DSHGGSSSRF SHDVNTGLNL LTANTLSDQS  120
TVDDDGISPN ADDKRSKNEL EALQQDLNRM NSENQKLKGM LSQVTNNYNT LQMQLVVLMQ  180
QKSPKIETSQ DHEMVNVAKH EENRVNEMIP RQFMDLGLAT TNTEVDELSH SSSEGKSRDR  240
SRTPINTSLE ESSLQKKEMV LFDHQEKSEL GSSRDNEESL EDHPSQGWVP NKIPKLNVES  300
QQQQQPMEAT MRKPRVSVRA RSEAPMITDG CQWRKYGQKM AKGNPCPRAY YRCTMAAACP  360
VRKQVQRCAE DRTILITTYE GTHNHPLPPA AMAMASTTST AATMLLSGSM SSADGLMNSN  420
FLTRTLLPCS SSMATISASA PFPTVTLDLT QSPNNPLQFQ RPTTQFHVPF MNQSPSQGFG  480
SQPTAQPQLP QLFGQSPYNQ SKFSGLQMSS QNGDQAHRSN NHQSPPRQQQ QQAQPNSLAD  540
TVSAATAAIT ADPNFTAALA AAISSIMSGG GQQTMNNNSS SCNTASNTNN STD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	1e-110	WRKY family protein