PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026407961.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 872aa MW: 100149 Da PI: 8.043

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026407961.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.4	3.2e-25	95	180	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY+eYA++ GF v+k++s++s+ ++++++++f C ++g+++ +++ +r+r++ +++Cka ++vk++ dg w+v+++++eHnHel+ XP_026407961.1 95 SFYKEYARREGFGVSKRNSRRSRISKKFIDAKFACCRYGTKQASDRV----SRPRPTAKIDCKAAMHVKRKVDGAWYVYSFVKEHNHELS 180 5**************************************998877....9**********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 872 aa Download sequence
MNIDLERRPG ESDMDDQLKE LNNGIHEHES SACVRTRDST DGELYSVDKV DVNANVNMNY 60 CVNDSASAIA SEGNEDVHLD PREGMEFESH EEAFSFYKEY ARREGFGVSK RNSRRSRISK 120 KFIDAKFACC RYGTKQASDR VSRPRPTAKI DCKAAMHVKR KVDGAWYVYS FVKEHNHELS 180 RDHAHFFRCH RDTNPNKDKI RTTPTVGVRL NEVCPSLPAS FHGFQNGNCF VQGIKNDLGN 240 GPRLALEVGD AQALNEFFLH MQEENPNFFY ALDLNRNQNL RNVFWVDAKG RHDYIDFSDV 300 ISFDSIYATN GYKVPIAPFI GVNHHGHFIL FGCAILADMN KSSFVWLFKT WLRAMGGQVP 360 KVIVTEQGNS MNEAVEEVFP NSRHCYCLWD ITRKIPDKLT HVIKRDENFM VKFNKCIYKS 420 WTKVDFEKRW WKMVDRFELR EDCWIQSLYE DRQKWVPIYL NDTFLAGMST SQRSESINFF 480 FDRYVTKVTT LKEFVEQYEV ALHDRCEKEA HADFESRQTV LPLKSPSPYE KQMSSIYTRE 540 IFKKFQYEVM GAHACHPVKE TEDDETVSFR VTDLERQQEF RVVWNGTKLV VSCSCLSFGL 600 GGFLCRHAMI VLQFSGVFSI PTSYILKRWT KDAKNRHILN QISNPVESRG QRYNDLCRRA 660 IRLAEEGSLS LESYNAALLV LEEGINKCVA ENDSLSSAGK PRLLTAYGLQ NIADKEADSI 720 MSLAAVSNSQ VTRRKVGSKR IQSGTEKTNR KRPNEKINIG LDENVACVGM SETLQVMQES 780 RTTMVDSYYG TQGSLQAMVW LNCTIKDSGV LKRRLSILTA VTPLKITCKR WDSGSREHQL 840 VVTMVLNGTC YQWDLRGQGH QTPIHSMPRQ TT

Sequence ? help Back to Top

Protein Sequence Length: 872 aa Download sequence

MNIDLERRPG ESDMDDQLKE LNNGIHEHES SACVRTRDST DGELYSVDKV DVNANVNMNY  60
CVNDSASAIA SEGNEDVHLD PREGMEFESH EEAFSFYKEY ARREGFGVSK RNSRRSRISK  120
KFIDAKFACC RYGTKQASDR VSRPRPTAKI DCKAAMHVKR KVDGAWYVYS FVKEHNHELS  180
RDHAHFFRCH RDTNPNKDKI RTTPTVGVRL NEVCPSLPAS FHGFQNGNCF VQGIKNDLGN  240
GPRLALEVGD AQALNEFFLH MQEENPNFFY ALDLNRNQNL RNVFWVDAKG RHDYIDFSDV  300
ISFDSIYATN GYKVPIAPFI GVNHHGHFIL FGCAILADMN KSSFVWLFKT WLRAMGGQVP  360
KVIVTEQGNS MNEAVEEVFP NSRHCYCLWD ITRKIPDKLT HVIKRDENFM VKFNKCIYKS  420
WTKVDFEKRW WKMVDRFELR EDCWIQSLYE DRQKWVPIYL NDTFLAGMST SQRSESINFF  480
FDRYVTKVTT LKEFVEQYEV ALHDRCEKEA HADFESRQTV LPLKSPSPYE KQMSSIYTRE  540
IFKKFQYEVM GAHACHPVKE TEDDETVSFR VTDLERQQEF RVVWNGTKLV VSCSCLSFGL  600
GGFLCRHAMI VLQFSGVFSI PTSYILKRWT KDAKNRHILN QISNPVESRG QRYNDLCRRA  660
IRLAEEGSLS LESYNAALLV LEEGINKCVA ENDSLSSAGK PRLLTAYGLQ NIADKEADSI  720
MSLAAVSNSQ VTRRKVGSKR IQSGTEKTNR KRPNEKINIG LDENVACVGM SETLQVMQES  780
RTTMVDSYYG TQGSLQAMVW LNCTIKDSGV LKRRLSILTA VTPLKITCKR WDSGSREHQL  840
VVTMVLNGTC YQWDLRGQGH QTPIHSMPRQ TT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein