PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026407078.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 361aa MW: 41964.6 Da PI: 5.8255

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026407078.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.6	1.2e-53	7	132	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPt+eelv++yL++k+++++++l +vik+vd+yk+ePwdL+ ++e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++sk XP_026407078.1 7 VPPGFRFHPTEEELVDYYLRNKISSRRIDL-NVIKDVDLYKIEPWDLQ--GTKEQSEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSK 98 69**************************.99**********8..334678*********************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ lvg++ktLvfykgrap+g+k+d +mheyrle XP_026407078.1 99 NSLLVGMRKTLVFYKGRAPNGQKSDYIMHEYRLE 132 ******************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MDASTNVPPG FRFHPTEEEL VDYYLRNKIS SRRIDLNVIK DVDLYKIEPW DLQGTKEQSE 60 WYFFSHKDKK YPTGTRTNRA TTAGFWKATG RDKAIYSKNS LLVGMRKTLV FYKGRAPNGQ 120 KSDYIMHEYR LETNENWTPQ EEGWVVCKVF KKKIAMTRME NEHDSPSYWY DENVTFMPTD 180 NIDESPKTYA QMETSFLNHN PYFCKKEIDS QSYHNIPHDP NFHQLPQLLE SQKVSYLATN 240 SVSAGNPNAA YGLDMNQLTQ EYMHEYSSSS VYDRGNINRE QVAMDQVTNW RVLDKFVASQ 300 LLSQQEVISR ERNYSNSSMD MLNATSDHVN ILVEQSNKEE VYAPDQCAST STSSGLIDPW 360 K

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MDASTNVPPG FRFHPTEEEL VDYYLRNKIS SRRIDLNVIK DVDLYKIEPW DLQGTKEQSE  60
WYFFSHKDKK YPTGTRTNRA TTAGFWKATG RDKAIYSKNS LLVGMRKTLV FYKGRAPNGQ  120
KSDYIMHEYR LETNENWTPQ EEGWVVCKVF KKKIAMTRME NEHDSPSYWY DENVTFMPTD  180
NIDESPKTYA QMETSFLNHN PYFCKKEIDS QSYHNIPHDP NFHQLPQLLE SQKVSYLATN  240
SVSAGNPNAA YGLDMNQLTQ EYMHEYSSSS VYDRGNINRE QVAMDQVTNW RVLDKFVASQ  300
LLSQQEVISR ERNYSNSSMD MLNATSDHVN ILVEQSNKEE VYAPDQCAST STSSGLIDPW  360
K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-103	NAC family protein