PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026406460.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 822aa MW: 89705.9 Da PI: 6.0991

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026406460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.2	2.9e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_026406460.1 24 RERWTEEEHNRFLEALKLHGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 822 aa Download sequence
MESYSCAEDL FLKARKPYTI TKQRERWTEE EHNRFLEALK LHGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEAVVKG VSLGQTLEIE IPPPRPKRKP SYPYPRKSYG ASSITSSVEV 120 TDGKLLTLAS SLYPGSEISE SKNDQSSQNP GGTENSAREK ETLDEGNCLE DNLFQEASCV 180 SVRSASQSSI STSMALQKTC TFREFVPSRK DIIESKDHIG KGDYPKLGTK DIQKSDRTEA 240 NLSHVDINGT GEMLSLKDSC HSSQDKLVRG NNTDKLKKPE NVGQLSTAAD EIQANHSYPR 300 HVPVHIVDMS SGACVQPQPP GVYPTPNICH LGAHGNPYIF PNLTVSAATQ PNSNITSRSS 360 LHHQTLPNFP PPFAPLHNQE TQKSAENISS AFGGLLMSAL LQNPAAHMAA SLAASFWPTP 420 NGETSLDSSA GPLGGFPTKQ MSATPNLAAI AAATVAAASA WWAAHGMLPL CPPMHTGFSY 480 PQPQPTTATP MDITHAPLVG NNERQDNSTN NSPWEAEQID PEVSEATKPQ NRTSKWQTLS 540 SSDSAESGGD SQSNCNKPKS AGEEQNPDTT AELVHDSNKL KMRKKVDRSS CGSNTASSTE 600 VETDALEQDE EEPEQDQKDR EESKEADSNH QVGEHNRRSR SSTSNTNGNT SANTNGSTST 660 NTNTNTNESW KEVSEEGRIA FQALFTRQVL PQSFSPPPDP KIIVQQQQQQ QQPAENIVME 720 GLKQISDVKD DDEQMLQLNL SSSNSWGVNP EHSSLLGNND TESSFLSMGL GHGKFKARRT 780 GFKPYKRCSV EAKESRITGG SGQCCEEKGP KRIRLEGDAS TL

Sequence ? help Back to Top

Protein Sequence Length: 822 aa Download sequence

MESYSCAEDL FLKARKPYTI TKQRERWTEE EHNRFLEALK LHGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KLEKEAVVKG VSLGQTLEIE IPPPRPKRKP SYPYPRKSYG ASSITSSVEV  120
TDGKLLTLAS SLYPGSEISE SKNDQSSQNP GGTENSAREK ETLDEGNCLE DNLFQEASCV  180
SVRSASQSSI STSMALQKTC TFREFVPSRK DIIESKDHIG KGDYPKLGTK DIQKSDRTEA  240
NLSHVDINGT GEMLSLKDSC HSSQDKLVRG NNTDKLKKPE NVGQLSTAAD EIQANHSYPR  300
HVPVHIVDMS SGACVQPQPP GVYPTPNICH LGAHGNPYIF PNLTVSAATQ PNSNITSRSS  360
LHHQTLPNFP PPFAPLHNQE TQKSAENISS AFGGLLMSAL LQNPAAHMAA SLAASFWPTP  420
NGETSLDSSA GPLGGFPTKQ MSATPNLAAI AAATVAAASA WWAAHGMLPL CPPMHTGFSY  480
PQPQPTTATP MDITHAPLVG NNERQDNSTN NSPWEAEQID PEVSEATKPQ NRTSKWQTLS  540
SSDSAESGGD SQSNCNKPKS AGEEQNPDTT AELVHDSNKL KMRKKVDRSS CGSNTASSTE  600
VETDALEQDE EEPEQDQKDR EESKEADSNH QVGEHNRRSR SSTSNTNGNT SANTNGSTST  660
NTNTNTNESW KEVSEEGRIA FQALFTRQVL PQSFSPPPDP KIIVQQQQQQ QQPAENIVME  720
GLKQISDVKD DDEQMLQLNL SSSNSWGVNP EHSSLLGNND TESSFLSMGL GHGKFKARRT  780
GFKPYKRCSV EAKESRITGG SGQCCEEKGP KRIRLEGDAS TL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46830.1	1e-44	MYB_related family protein