PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026405985.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 419aa MW: 47336.3 Da PI: 9.7107 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.8 | 9e-17 | 129 | 174 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v q+G+ +W++I+++++ gR++k+c++rw++ XP_026405985.1 129 RGHWRPAEDSKLKELVSQYGPQNWNLISEKLQ-GRSGKSCRLRWFNQ 174 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 52.2 | 1.4e-16 | 181 | 224 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l+ a++++G++ W+ I+r ++ gRt++ +k++w+ XP_026405985.1 181 RRAFSEEEEERLLAAHRLYGNR-WAMISRLFP-GRTDNGVKNHWHV 224 678*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 419 aa Download sequence |
MTLQRPQQNL QKSSGGDESS YFRRRFQEIN FLSSRPSSPT SLSLSFGPFS SSSKDRSTMS 60 KSSDLSFQVM GGSNDEQNIK SWSFQTTSEE TAIKNEMPCN ADYQKQQESE SFGHGSNQQS 120 TSSVHSIARG HWRPAEDSKL KELVSQYGPQ NWNLISEKLQ GRSGKSCRLR WFNQLDPRIN 180 RRAFSEEEEE RLLAAHRLYG NRWAMISRLF PGRTDNGVKN HWHVIMARKQ REQSNNLSRR 240 SSRKPFLPIP TASTTTTYDH QTLLMMKHED LKLISSYHQK NAAAGGARSE STITTKDDQS 300 TSTCTNLSLN SSSAARTQPI SPNQMHFDFR MGPFEENMMS FSNRCLYSEK TKTGINKHDN 360 YSMKMVIGLD HHPSGGYSDS NSEISANDSS VHKRGRHNLN TGDNEALPFI DFLGVGTTA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 2e-67 | MYB family protein |