PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405960.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 594aa MW: 65741.8 Da PI: 9.3021

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405960.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.5e-18	60	106	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+ Ed l avk +Gg++Wk+Ia ++ +Rt+ qc +rwqk+l XP_026405960.1 60 KGGWTESEDSMLTAAVKTHGGKNWKKIATCFK-NRTDVQCLHRWQKVL 106 688**************************9.**********986 PP
2	Myb_DNA-binding	55.3	1.6e-17	112	158	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+l++++v ++G++ W+ Ia+ ++ gR +kqc++rw+++l XP_026405960.1 112 KGPWTKQEDDLILELVGKYGSKKWSIIAQSLP-GRIGKQCRERWHNHL 158 79****************************.***********97 PP
3	Myb_DNA-binding	49.3	1.1e-15	164	206	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT eE+ l+++++ +G++ W+ Iar ++ gR ++++k++w+ XP_026405960.1 164 KDAWTHEEEMTLIHYHQIYGNK-WAEIARFLP-GRADNSIKNHWN 206 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
MEDVKQEEAN SSVTKEVTAA APSSSSVSDS SSDTSLPKPA FVKGSLISKR TTGPTRRSKK 60 GGWTESEDSM LTAAVKTHGG KNWKKIATCF KNRTDVQCLH RWQKVLNPEL VKGPWTKQED 120 DLILELVGKY GSKKWSIIAQ SLPGRIGKQC RERWHNHLNP AIKKDAWTHE EEMTLIHYHQ 180 IYGNKWAEIA RFLPGRADNS IKNHWNCSVK KKLDSYLPSD LLKINPGVLN HENVRVDTTM 240 QGPGRTYAFD TKILPVSRPG NHLVNLTLGN SIGGRNGEQM QPFQTIESRA LQKQVAFATK 300 PIQGAARSAT EGIPPKDLKL SIFSLSPPGQ PPEHVTSTRS PFLSLDPNPC DTRKNQAVLT 360 EAESATTAMR FPETPKRAKY CSEHGDYRDH DGRQSKVFNA SPSRDGTGYG GLYYEPPQLT 420 SCDILSENSR FLNSRSPVCS TPPSRLRNFS VDASSPEAVL KSAAKSFKNT PSIIRKRGRQ 480 ICGCTGWAPY ACYSDGACTP EVRTHGFSDI NGFMESSPHA HSGREDLNSR DLLNVKWLSL 540 STPNALEHEV AATVKSVRLE HVFDMECDDS RAVRHSDTSS RDLSNRAQSE VSAS

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

MEDVKQEEAN SSVTKEVTAA APSSSSVSDS SSDTSLPKPA FVKGSLISKR TTGPTRRSKK  60
GGWTESEDSM LTAAVKTHGG KNWKKIATCF KNRTDVQCLH RWQKVLNPEL VKGPWTKQED  120
DLILELVGKY GSKKWSIIAQ SLPGRIGKQC RERWHNHLNP AIKKDAWTHE EEMTLIHYHQ  180
IYGNKWAEIA RFLPGRADNS IKNHWNCSVK KKLDSYLPSD LLKINPGVLN HENVRVDTTM  240
QGPGRTYAFD TKILPVSRPG NHLVNLTLGN SIGGRNGEQM QPFQTIESRA LQKQVAFATK  300
PIQGAARSAT EGIPPKDLKL SIFSLSPPGQ PPEHVTSTRS PFLSLDPNPC DTRKNQAVLT  360
EAESATTAMR FPETPKRAKY CSEHGDYRDH DGRQSKVFNA SPSRDGTGYG GLYYEPPQLT  420
SCDILSENSR FLNSRSPVCS TPPSRLRNFS VDASSPEAVL KSAAKSFKNT PSIIRKRGRQ  480
ICGCTGWAPY ACYSDGACTP EVRTHGFSDI NGFMESSPHA HSGREDLNSR DLLNVKWLSL  540
STPNALEHEV AATVKSVRLE HVFDMECDDS RAVRHSDTSS RDLSNRAQSE VSAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	1e-90	MYB family protein