PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405959.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 595aa MW: 65828.9 Da PI: 9.3021

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.5e-18	61	107	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+ Ed l avk +Gg++Wk+Ia ++ +Rt+ qc +rwqk+l XP_026405959.1 61 KGGWTESEDSMLTAAVKTHGGKNWKKIATCFK-NRTDVQCLHRWQKVL 107 688**************************9.**********986 PP
2	Myb_DNA-binding	55.3	1.6e-17	113	159	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+l++++v ++G++ W+ Ia+ ++ gR +kqc++rw+++l XP_026405959.1 113 KGPWTKQEDDLILELVGKYGSKKWSIIAQSLP-GRIGKQCRERWHNHL 159 79****************************.***********97 PP
3	Myb_DNA-binding	49.3	1.1e-15	165	207	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT eE+ l+++++ +G++ W+ Iar ++ gR ++++k++w+ XP_026405959.1 165 KDAWTHEEEMTLIHYHQIYGNK-WAEIARFLP-GRADNSIKNHWN 207 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 595 aa Download sequence
MEDVKQEEAN SSVTKEVTAA APSSSSVSDS SSDTSLPKPA FVKGSSLISK RTTGPTRRSK 60 KGGWTESEDS MLTAAVKTHG GKNWKKIATC FKNRTDVQCL HRWQKVLNPE LVKGPWTKQE 120 DDLILELVGK YGSKKWSIIA QSLPGRIGKQ CRERWHNHLN PAIKKDAWTH EEEMTLIHYH 180 QIYGNKWAEI ARFLPGRADN SIKNHWNCSV KKKLDSYLPS DLLKINPGVL NHENVRVDTT 240 MQGPGRTYAF DTKILPVSRP GNHLVNLTLG NSIGGRNGEQ MQPFQTIESR ALQKQVAFAT 300 KPIQGAARSA TEGIPPKDLK LSIFSLSPPG QPPEHVTSTR SPFLSLDPNP CDTRKNQAVL 360 TEAESATTAM RFPETPKRAK YCSEHGDYRD HDGRQSKVFN ASPSRDGTGY GGLYYEPPQL 420 TSCDILSENS RFLNSRSPVC STPPSRLRNF SVDASSPEAV LKSAAKSFKN TPSIIRKRGR 480 QICGCTGWAP YACYSDGACT PEVRTHGFSD INGFMESSPH AHSGREDLNS RDLLNVKWLS 540 LSTPNALEHE VAATVKSVRL EHVFDMECDD SRAVRHSDTS SRDLSNRAQS EVSAS

Sequence ? help Back to Top

Protein Sequence Length: 595 aa Download sequence

MEDVKQEEAN SSVTKEVTAA APSSSSVSDS SSDTSLPKPA FVKGSSLISK RTTGPTRRSK  60
KGGWTESEDS MLTAAVKTHG GKNWKKIATC FKNRTDVQCL HRWQKVLNPE LVKGPWTKQE  120
DDLILELVGK YGSKKWSIIA QSLPGRIGKQ CRERWHNHLN PAIKKDAWTH EEEMTLIHYH  180
QIYGNKWAEI ARFLPGRADN SIKNHWNCSV KKKLDSYLPS DLLKINPGVL NHENVRVDTT  240
MQGPGRTYAF DTKILPVSRP GNHLVNLTLG NSIGGRNGEQ MQPFQTIESR ALQKQVAFAT  300
KPIQGAARSA TEGIPPKDLK LSIFSLSPPG QPPEHVTSTR SPFLSLDPNP CDTRKNQAVL  360
TEAESATTAM RFPETPKRAK YCSEHGDYRD HDGRQSKVFN ASPSRDGTGY GGLYYEPPQL  420
TSCDILSENS RFLNSRSPVC STPPSRLRNF SVDASSPEAV LKSAAKSFKN TPSIIRKRGR  480
QICGCTGWAP YACYSDGACT PEVRTHGFSD INGFMESSPH AHSGREDLNS RDLLNVKWLS  540
LSTPNALEHE VAATVKSVRL EHVFDMECDD SRAVRHSDTS SRDLSNRAQS EVSAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	2e-90	MYB family protein