PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026405917.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 291aa MW: 32845.3 Da PI: 6.514

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026405917.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4e-17	5	52	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l ++v ++G g+W+tI+ + g+ R +k+c++rw +yl XP_026405917.1 5 KGLWSPEEDQRLRNYVLRHGHGCWSTIPIRAGLQRNGKSCRLRWINYL 52 678*******************************************97 PP
2	Myb_DNA-binding	58	2.2e-18	58	103	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +T eE+e +v ++++lG++ W+ Ia++++ gRt++++k++w++yl XP_026405917.1 58 RGTFTSEEEETFVGLHRLLGNK-WSQIAHHLP-GRTDNEIKNYWNSYL 103 899*****************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MKHKKGLWSP EEDQRLRNYV LRHGHGCWST IPIRAGLQRN GKSCRLRWIN YLRPGLRRGT 60 FTSEEEETFV GLHRLLGNKW SQIAHHLPGR TDNEIKNYWN SYLKKKLMKA GEFNKNQSVN 120 SDFDEFKSTS ASAASTGTSF TRISSAGSFQ SSEQIGGTGI DHLSSTTASN SKPVRESNQS 180 FLPKVFFAEW LFLDQDHSEN GSNSGNSNLA PEEILDDSSV FTGGISEEFL PQEEVYGSEF 240 DNGLLHNSGS RYVRFCPKVE EPGNLGTDFM NYGNIAEIHS EFTMLSNDMF Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25560.1	3e-57	MYB family protein