PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026404453.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 280aa MW: 30106.5 Da PI: 7.8752

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026404453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.7	1.1e-12	6	50	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT eEd+ + +a+ + + +W++Ia+ ++ gRt++++k+++ XP_026404453.1 6 EWTREEDKAFEKAIISNPEDsidRWEKIAEALP-GRTAEEIKNHYE 50 7******************************.********96 PP
2	Myb_DNA-binding	40.5	6.2e-13	118	162	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++G+g+W++I+r + Rt+ q+ s+ qky XP_026404453.1 118 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKY 162 6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MNSCSEWTRE EDKAFEKAII SNPEDSIDRW EKIAEALPGR TAEEIKNHYE LLVEDVNNIE 60 AGLVTLPNYI SASEGSTEHA SEGGTSKKGG IHLAHFQSES NHGSKSSRAD QERRKGIAWT 120 EDEHRLFLLG LDKYGKGDWR SISRNFVVSR TPTQVASHAQ KYFIRLNSMN KDRRRSSIHD 180 ITSVGSGDVS SPQGPITGQT NGATPGGGSS SKSTKPQAQP SSGAPAVGVY GAPTIGQPVG 240 GPLIPAVGTP VNLSAPPHMA YGIRAPVPSM PPMTYPMPHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-107	MYB family protein