PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026404080.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 333aa    MW: 37548.5 Da    PI: 9.5188
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026404080.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.58.5e-15956148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+ Ed ll ++++++G g W+ ++ + g +R++k+c++rw++yl
   XP_026404080.1  9 KGSWTEAEDNLLRKCIEKYGEGKWHQVPIRAGINRCRKSCRLRWLNYL 56
                     799*****************************99************97 PP
2Myb_DNA-binding35.13.1e-1162106147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg + ++E +l+ + +k+lG++ W  Ia +++ gRt++++k++w+++
   XP_026404080.1  62 RGQFEPDEVDLIGRMHKLLGNR-WIMIAGRLP-GRTANDVKNFWNTH 106
                      78999*****************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MDSPGGLRKG SWTEAEDNLL RKCIEKYGEG KWHQVPIRAG INRCRKSCRL RWLNYLRPCI  60
KRGQFEPDEV DLIGRMHKLL GNRWIMIAGR LPGRTANDVK NFWNTHFNNK RHISSDQIRG  120
VGGTRIRTLG KASSTATIVI KPQAINFSRN SSWMSRKINM EQQIVQKRHH SAIDCSGKVL  180
VLPSIEYSFG DEAGSWCENN IMDSFTNGSS LFTKFCVNDG DDINQTMVPA AIIDEGEDKI  240
NNNTVGEGKS TTCTTAGSST AGTVDTFDDD FFLEERIWGL LGPNCNFFRL KIKPSFHVSP  300
SWNPSPIYQR TKVSGNRNAF SSLSIHKRIS LEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.14e-60MYB family protein