PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026403468.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 991aa MW: 111194 Da PI: 9.5912 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.1 | 8.4e-13 | 336 | 381 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+e+d +l av+ +G ++W +Ia m gRt+ qc +rw+k l XP_026403468.1 336 RDWTEEDDGQLRTAVEAFGANNWQLIAFNME-GRTGTQCSNRWLKTL 381 57*****************************.***********9975 PP | |||||||
2 | Myb_DNA-binding | 55.2 | 1.6e-17 | 389 | 433 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 grWT eEd++l+ av ++Gg+tW++Ia+ ++ gRt qc++rw + XP_026403468.1 389 GRWTVEEDKRLKVAVLLFGGKTWAKIAQFIP-GRTQAQCRERWVNC 433 8******************************.***********986 PP | |||||||
3 | Myb_DNA-binding | 44.4 | 3.8e-14 | 442 | 482 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT+eEd +l+ av+++G W+++a+ m+ gRt+ c rw XP_026403468.1 442 PWTEEEDCQLKAAVEEYGHC-WSKVAASMP-GRTDSKCLRRWK 482 8*****************99.*********.***********6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 991 aa Download sequence |
MLNYHLFSCI SILSLSPDLE NPDAPREPLS SSEEACNIYQ PSEIPCSSTQ NQSSKLIKWH 60 QSEAGFPNPE AARLFVEALR KNRSCQKFIR SKLLQIEAKI EENKKLKERV KILKDFQVAC 120 KQRAGRAVSL RKDPRIQLIS VPKFRNSQTT KANSKKAGAI SFGPVENSHV AKYRMAMKRF 180 PLCLSRPRWT QTEKDNLWKG IKQQFQEMLL QESIEGFSAS GDSNDLDDIM ASIEDFEVTP 240 ENVRTFLPKV DWERLASTYV TGRSGAECEQ RWLNVEDPLI NHSPWTKNED KKLLYILQQG 300 GIYNWINISI TLGTNRTPFQ CLARFQRSLN ANIIKRDWTE EDDGQLRTAV EAFGANNWQL 360 IAFNMEGRTG TQCSNRWLKT LNPARKRVGR WTVEEDKRLK VAVLLFGGKT WAKIAQFIPG 420 RTQAQCRERW VNCLDPSLNL KPWTEEEDCQ LKAAVEEYGH CWSKVAASMP GRTDSKCLRR 480 WKFLFPHEVP LIQAAKKIKR SALISNFVDR ESERPTLDHN DFVALPGPES VLALESGTTA 540 GKEKKSRREP KLKAAKDLVP CDNIPKRRSS KRSRSEAQMC RGGDSRIQIA DDGETCGEDG 600 IISQKKKSTI RRCSKKNHCE STDLGNNQLI PEDSTTSMIT ESEDKIEDGT VLGRKRKAPY 660 GRLKKNHSIN IDSGNVSLLP EESTTLRITD GDDNTANCGE DDAGSRKKKR MPNKRLKNNQ 720 CTNADSGDIP LLPEDLTVGD DNTANCREDG TGSRKKKKTP NKRLKNNQST NADSGDIPLL 780 PEYVTVGVDN TANCGEDDSF LGRKKEAPSR RLRKIQCTDS ASGDQDISFL TEDLTVLRIG 840 NGDVSIEKSG AISGMKKRVS KRNPKYIQSA NTISGSKDVP EKLAILKVTK REKSSVNQGE 900 VGVAPGNEKS ASNKRLKRSR STEHDSSLMD GDLTIASIAD AISRKKKRSI NKRLKTNNCI 960 QPASANIDNS LCPEDTAIRI NDSEDNYNNK V |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 567 | 573 | RRSSKRS |
2 | 707 | 717 | KKKRMPNKRLK |
3 | 945 | 955 | KKKRMPNKRLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18100.2 | 1e-178 | MYB family protein |