PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026403460.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 1103aa MW: 123758 Da PI: 8.0841

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026403460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.9	9.5e-13	448	493	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+e+d +l av+ +G ++W +Ia m gRt+ qc +rw+k l XP_026403460.1 448 RDWTEEDDGQLRTAVEAFGANNWQLIAFNME-GRTGTQCSNRWLKTL 493 57***************************.*********9975 PP
2	Myb_DNA-binding	55	1.8e-17	501	545	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 grWT eEd++l+ av ++Gg+tW++Ia+ ++ gRt qc++rw + XP_026403460.1 501 GRWTVEEDKRLKVAVLLFGGKTWAKIAQFIP-GRTQAQCRERWVNC 545 8****************************.*********986 PP
3	Myb_DNA-binding	44.2	4.3e-14	554	594	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT+eEd +l+ av+++G W+++a+ m+ gRt+ c rw XP_026403460.1 554 PWTEEEDCQLKAAVEEYGHC-WSKVAASMP-GRTDSKCLRRWK 594 8***************99.*****.*********6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1103 aa Download sequence
MAILEDVNSC SEDERDEGLD EDIEALRAAC LLTGNTPDEE EIEEDVHNDT TEISIPSDKN 60 DNPNPIHDDD DDFELVRSIK KKFSIPPDDG GAVFMKPLNS LPPFVASDGE NDDFETLRVV 120 RRRFCDYDAD LENPDAPREP LSSSEEACNI YQPSEIPCSS TQNQSSKLIK WHQSEAGFPN 180 PEAARLFVEA LRKNRSCQKF IRSKLLQIEA KIEENKKLKE RVKILKDFQV ACKQRAGRAV 240 SLRKDPRIQL ISVPKFRNSQ TTKANSKKAG AISFGPVENS HVAKYRMAMK RFPLCLSRPR 300 WTQTEKDNLW KGIKQQFQEM LLQESIEGFS ASGDSNDLDD IMASIEDFEV TPENVRTFLP 360 KVDWERLAST YVTGRSGAEC EQRWLNVEDP LINHSPWTKN EDKKLLYILQ QGGIYNWINI 420 SITLGTNRTP FQCLARFQRS LNANIIKRDW TEEDDGQLRT AVEAFGANNW QLIAFNMEGR 480 TGTQCSNRWL KTLNPARKRV GRWTVEEDKR LKVAVLLFGG KTWAKIAQFI PGRTQAQCRE 540 RWVNCLDPSL NLKPWTEEED CQLKAAVEEY GHCWSKVAAS MPGRTDSKCL RRWKFLFPHE 600 VPLIQAAKKI KRSALISNFV DRESERPTLD HNDFVALPGP ESVLALESGT TAGKEKKSRR 660 EPKLKAAKDL VPCDNIPKRR SSKRSRSEAQ MCRGGDSRIQ IADDGETCGE DGIISQKKKS 720 TIRRCSKKNH CESTDLGNNQ LIPEDSTTSM ITESEDKIED GTVLGRKRKA PYGRLKKNHS 780 INIDSGNVSL LPEESTTLRI TDGDDNTANC GEDDAGSRKK KRMPNKRLKN NQCTNADSGD 840 IPLLPEDLTV GDDNTANCRE DGTGSRKKKK TPNKRLKNNQ STNADSGDIP LLPEYVTVGV 900 DNTANCGEDD SFLGRKKEAP SRRLRKIQCT DSASGDQDIS FLTEDLTVLR IGNGDVSIEK 960 SGAISGMKKR VSKRNPKYIQ SANTISGSKD VPEKLAILKV TKREKSSVNQ GEVGVAPGNE 1020 KSASNKRLKR SRSTEHDSSL MDGDLTIASI ADAISRKKKR SINKRLKTNN CIQPASANID 1080 NSLCPEDTAI RINDSEDNYN NKV

Sequence ? help Back to Top

Protein Sequence Length: 1103 aa Download sequence

MAILEDVNSC SEDERDEGLD EDIEALRAAC LLTGNTPDEE EIEEDVHNDT TEISIPSDKN  60
DNPNPIHDDD DDFELVRSIK KKFSIPPDDG GAVFMKPLNS LPPFVASDGE NDDFETLRVV  120
RRRFCDYDAD LENPDAPREP LSSSEEACNI YQPSEIPCSS TQNQSSKLIK WHQSEAGFPN  180
PEAARLFVEA LRKNRSCQKF IRSKLLQIEA KIEENKKLKE RVKILKDFQV ACKQRAGRAV  240
SLRKDPRIQL ISVPKFRNSQ TTKANSKKAG AISFGPVENS HVAKYRMAMK RFPLCLSRPR  300
WTQTEKDNLW KGIKQQFQEM LLQESIEGFS ASGDSNDLDD IMASIEDFEV TPENVRTFLP  360
KVDWERLAST YVTGRSGAEC EQRWLNVEDP LINHSPWTKN EDKKLLYILQ QGGIYNWINI  420
SITLGTNRTP FQCLARFQRS LNANIIKRDW TEEDDGQLRT AVEAFGANNW QLIAFNMEGR  480
TGTQCSNRWL KTLNPARKRV GRWTVEEDKR LKVAVLLFGG KTWAKIAQFI PGRTQAQCRE  540
RWVNCLDPSL NLKPWTEEED CQLKAAVEEY GHCWSKVAAS MPGRTDSKCL RRWKFLFPHE  600
VPLIQAAKKI KRSALISNFV DRESERPTLD HNDFVALPGP ESVLALESGT TAGKEKKSRR  660
EPKLKAAKDL VPCDNIPKRR SSKRSRSEAQ MCRGGDSRIQ IADDGETCGE DGIISQKKKS  720
TIRRCSKKNH CESTDLGNNQ LIPEDSTTSM ITESEDKIED GTVLGRKRKA PYGRLKKNHS  780
INIDSGNVSL LPEESTTLRI TDGDDNTANC GEDDAGSRKK KRMPNKRLKN NQCTNADSGD  840
IPLLPEDLTV GDDNTANCRE DGTGSRKKKK TPNKRLKNNQ STNADSGDIP LLPEYVTVGV  900
DNTANCGEDD SFLGRKKEAP SRRLRKIQCT DSASGDQDIS FLTEDLTVLR IGNGDVSIEK  960
SGAISGMKKR VSKRNPKYIQ SANTISGSKD VPEKLAILKV TKREKSSVNQ GEVGVAPGNE  1020
KSASNKRLKR SRSTEHDSSL MDGDLTIASI ADAISRKKKR SINKRLKTNN CIQPASANID  1080
NSLCPEDTAI RINDSEDNYN NKV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	679	685	RRSSKRS
2	819	829	KKKRMPNKRLK
3	1057	1067	KKKRMPNKRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18100.1	0.0	MYB family protein