PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026403249.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 332aa MW: 37473.2 Da PI: 7.3714

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026403249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.6	1.6e-14	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++l++ +++ G+g +W + +++ g++R++k+c++rw++yl XP_026403249.1 14 KGPWSPEEDLILKQFIEKRGTGgNWISLPHRAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	35.5	2.2e-11	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ +Ed ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_026403249.1 69 GEFSDDEDRIICTLYSSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDLILKQFIE KRGTGGNWIS LPHRAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDDEDRIIC TLYSSIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLIS 120 SSTNNSGTSA TILVPSTFPD HHHHHTNINL FSHHHSPYQV SAPSSTYYDQ KPVLMNSSNH 180 LNNNNNTTTY SPPNLMSLLS DNQSQHSCSS SDNGSTSNQV SYGTSTTTHA FVGSTQEHNM 240 AYHEGFYNFN ITSGVEEDHD EVHKSSSIPT PSGGGVSHSY DPWNERQNGL WSDHQNHQQL 300 EEIKQLVSSN PNHNSGWNFF MADAQEKFMM YY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	1e-67	MYB family protein