PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401720.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HB-other

Protein Properties

Length: 423aa MW: 46597.9 Da PI: 7.4775

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401720.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.5	2e-07	14	76	6	56
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRakek 56 +ft++++ e+e++ +k ps e ++ +A+k + ++qV +WFqNrR+ +k XP_026401720.1 14 RFTANEVAEMEACLQKanFIIPSLEVIRSIAEKFsasaersgkmIVHQKQVLNWFQNRRYAQK 76 689999999999999842346999999**999999999999899***********9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MGRPPNVGPG PSFRFTANEV AEMEACLQKA NFIIPSLEVI RSIAEKFSAS AERSGKMIVH 60 QKQVLNWFQN RRYAQKAKTM KPSENLSVTP KSREDLVPLR NVPHIMPVPS GRSTSDSNAL 120 MEFEARSSRD GAWYDVAAFI SHRMFETGDP EVRVRFAGFG AEEDEWINVR KHVRQRSLPC 180 EASECVAVLA GDLILCFQEG KDQALYYDAH VLDAQRRRHD VRGCRCRFLV RYDHDQAEEI 240 VQLRKVCRRP ETDYRLRLLH SAREFVRVDP KREMGEKTTS AVNSCSRNYS NSEPVKSHPA 300 EVTADRKVKE SPVGVTAETI GTAVAIKVET GTKCNDNIGN PDNQMPSGGD AVTASAITSV 360 RNNPNTSTNS GNSENDKTAS ANTSASNNPN TITTSGSSEN DEMAVATISA SSNPNTVTTS 420 GND

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MGRPPNVGPG PSFRFTANEV AEMEACLQKA NFIIPSLEVI RSIAEKFSAS AERSGKMIVH  60
QKQVLNWFQN RRYAQKAKTM KPSENLSVTP KSREDLVPLR NVPHIMPVPS GRSTSDSNAL  120
MEFEARSSRD GAWYDVAAFI SHRMFETGDP EVRVRFAGFG AEEDEWINVR KHVRQRSLPC  180
EASECVAVLA GDLILCFQEG KDQALYYDAH VLDAQRRRHD VRGCRCRFLV RYDHDQAEEI  240
VQLRKVCRRP ETDYRLRLLH SAREFVRVDP KREMGEKTTS AVNSCSRNYS NSEPVKSHPA  300
EVTADRKVKE SPVGVTAETI GTAVAIKVET GTKCNDNIGN PDNQMPSGGD AVTASAITSV  360
RNNPNTSTNS GNSENDKTAS ANTSASNNPN TITTSGSSEN DEMAVATISA SSNPNTVTTS  420
GND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	1e-111	HB-other family protein