PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026401707.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 467aa    MW: 53284.9 Da    PI: 7.6227
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026401707.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B398.54.1e-31107211199
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 
                     f+kv tpsdv+k++rlv+pk++ae++    +  +e++  l +ed+sg+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++   +  +
  XP_026401707.1 107 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSAANEKGLLLNFEDRSGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGaAEsYK 201
                     89***************************955556889*************************************************65333355 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      ++++ ++r+
  XP_026401707.1 202 DRFYIDWRRR 211
                     5566666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    
MEFVKESRDG LYSDHPQEDQ EEEVLMADNN STTSKQLFSS SSSSSFSSLS PSSSSSQYRN  60
VVVHHHQQQQ QQQQQQIHQL PANFLSGMSN SSAPEVIGEF IEKEHMFDKV VTPSDVGKLN  120
RLVIPKQHAE KYFPLDSAAN EKGLLLNFED RSGKPWRFRY SYWNSSQSYV MTKGWSRFVK  180
EKKLDAGDIV SFERGAAESY KDRFYIDWRR RPQAPDLSLH HHQHHHSNPL SFPRTVIPWG  240
TTHARLFFPQ NLAVSSSTRD HLQLNYDHHH HQQQQQHYHY HQQQLQQRLS SSTSSTSYGN  300
YSNTNMVNNN QRPGSVVYLR SSSSPITTRI PDHQAHHQQQ QVGLMQQYTS GDNHNNMAMV  360
FDSVPVVHGQ AAAKRVRLFG VNLECPISED DNECDILSST TIPMNTTIGG SSIHTHHPHH  420
QILNNPSQPI HSAPPPHLQL RVYNGAPLPT MPTELPKRGR PSLSFDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.12e-64B3 family protein