PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026401671.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 844aa    MW: 93790.6 Da    PI: 6.2763
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026401671.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.82.4e-20121176156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++e+e+lF+++++p+ ++r +L++ lgL+ rqVk+WFqNrR+++k
  XP_026401671.1 121 KKRYHRHTARQIQEMEALFKECPHPDDKQRMRLSQDLGLKPRQVKFWFQNRRTQMK 176
                     688899***********************************************998 PP
2START164.19.9e-523265523206
                     HHHHHHHHHHHHHHC-TT-EEEE..EXCCTTEEEEEEESSS.............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EE CS
           START   3 aeeaaqelvkkalaeepgWvkss..esengdevlqkfeeskv............dsgealrasgvvdmvlallveellddkeqWdetla....ka 79 
                     a  a++elvk+ +a+ep+W +    + +n +e  + f+                +++ea r+s+vv+m++ +lv  +ld + +W e ++    +a
  XP_026401671.1 326 AMNAMDELVKMCQAAEPLWIRCNnkDVLNVEEHAKMFPW--PvmnnnqkqheneFRVEATRDSAVVFMNSITLVDAFLDAN-KWMELFPsivsRA 417
                     6689*****************998844444444444432..02455566667889**************************.************* PP

                     EEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEE CS
           START  80 etlevissg......galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtw 166
                     +t++ is+g      + l+lm ae+q+l+plvp R+  f+Ry+ q  ++g+wvivd  +d+    + +ss+ R ++ pSg++i++++ng+s+v+w
  XP_026401671.1 418 KTVQIISTGvsghasNSLHLMHAEFQVLTPLVPtREAQFLRYCLQnAEEGTWVIVDFPIDNFHADNIQSSSLRYRKKPSGCIIQDMPNGYSRVIW 512
                     *************************************************************999999**************************** PP

                     EE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 167 vehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     veh++l+ + +h++++++v+sg+a+ga +w+a lq+qce+
  XP_026401671.1 513 VEHAELEHKPVHQIFNQFVSSGMAFGAHRWLAVLQQQCER 552
                     **************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 844 aa     Download sequence    
MYGDCQVMSS MGGGGNNNNI VSTTALDHHH QHLFSSPIRN PNNINYNFMS NSMVPSYHPY  60
ASIIPKEEVG LQMIIGNNKE DDMESGSADG SGHIHDQGGT NSADDELLLQ ETDQQQQNPK  120
KKRYHRHTAR QIQEMEALFK ECPHPDDKQR MRLSQDLGLK PRQVKFWFQN RRTQMKAQQD  180
RSDNIILRAE NDNLKNENYR LQAALRNVSC PNCGGAAILG EMSLDEQHLR LENARLKEEL  240
ERLACIAPRF NVRQMQALGH VPHHLAPSLE LDMGIYSRNF QEPQLGNCGD IMSMSSCNMP  300
ENQHELQIAG CCLILDQEKP LAMQFAMNAM DELVKMCQAA EPLWIRCNNK DVLNVEEHAK  360
MFPWPVMNNN QKQHENEFRV EATRDSAVVF MNSITLVDAF LDANKWMELF PSIVSRAKTV  420
QIISTGVSGH ASNSLHLMHA EFQVLTPLVP TREAQFLRYC LQNAEEGTWV IVDFPIDNFH  480
ADNIQSSSLR YRKKPSGCII QDMPNGYSRV IWVEHAELEH KPVHQIFNQF VSSGMAFGAH  540
RWLAVLQQQC ERFASLMARN ISDLGGVIPN SESRKNLMKL SHRMMRTFCF NISCSGGQSW  600
TVLSETSVDT VRITTRKSID PGQPSGLILC AVSTTWLPFS HQQVFEFLRD ERRRSQQLDV  660
LSGGTSSQEI AHIASGSHPG NCISLLRINA ASNSAQNVEL MLQESCTDSL GSMVVYTTID  720
VDSVQQTMNG GDSSYFPILP LGFVIYPANH INNNGENGPA SSSDDQVNGP TSGCLLTVGI  780
QILASTIPGA KLNFSSATAI NNHICNAVHQ INAVLSSSNN HSSGSPDGCN TAGGSCPEPS  840
AASE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein