PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401046.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 359aa MW: 40612.4 Da PI: 10.4507

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401046.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.2	3e-18	27	124	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.....rkksgryvltkGWkeFvkangLkegDfvvFkld.grse 89 ff++l s +++s+ l +p kf++++ + ke s ++l+ +sgr W+v+l + +++r +l+kGW+ Fvk+++LkegD++ +k++ g s XP_026401046.1 27 FFTTL--SKSFRSK-LKFPEKFVRKC-LRKELSNIVSLRGPSGRIWTVELMRkgsegDDGDERLYLGKGWEIFVKEHNLKEGDVLFLKYKlGGSV 117 55666..5666665.9********.4567999************6556655555566***********************9955477 PP E..EEEEE- CS B3 90 felvvkvfr 98 f v vf+ XP_026401046.1 118 F--DVLVFD 124 7..776665 PP
2	B3	44.4	3.1e-14	256	340	1	87
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+ ++++ +v++ +++p fa+++ + + ++ +g++W ++ ++++ + ++GW++Fv++n+Lk+gD+++F+ +++ XP_026401046.1 256 FVIAMKSTHVSSIFTMTVPVIFANKNI--P-RATKFASLKVNGKTWLAEYVSfGASKSSGFRGRGWRNFVRSNNLKVGDVCLFETTSS 340 6677889999999********8883..2.33456666789****65455555566899******************6654 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MDQRCKEDRS NMGRSDEDVE KFKVVHFFTT LSKSFRSKLK FPEKFVRKCL RKELSNIVSL 60 RGPSGRIWTV ELMRKGSEGD DGDERLYLGK GWEIFVKEHN LKEGDVLFLK YKLGGSVFDV 120 LVFDDENFCE KESSYFVRNC KNEGCHMSNG RLNERKRVER EPSAEITEPK RLPKKVKGKR 180 IASSDDEVED SGSKTSRLPG RKGTTPAYVK REQGSEEKES QVDPMALVLR NGAPKVKGAA 240 YPQALREGTR KGKPHFVIAM KSTHVSSIFT MTVPVIFANK NIPRATKFAS LKVNGKTWLA 300 EYVSFGASKS SGFRGRGWRN FVRSNNLKVG DVCLFETTSS SSSKTSKKST NLDVTIFRN

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MDQRCKEDRS NMGRSDEDVE KFKVVHFFTT LSKSFRSKLK FPEKFVRKCL RKELSNIVSL  60
RGPSGRIWTV ELMRKGSEGD DGDERLYLGK GWEIFVKEHN LKEGDVLFLK YKLGGSVFDV  120
LVFDDENFCE KESSYFVRNC KNEGCHMSNG RLNERKRVER EPSAEITEPK RLPKKVKGKR  180
IASSDDEVED SGSKTSRLPG RKGTTPAYVK REQGSEEKES QVDPMALVLR NGAPKVKGAA  240
YPQALREGTR KGKPHFVIAM KSTHVSSIFT MTVPVIFANK NIPRATKFAS LKVNGKTWLA  300
EYVSFGASKS SGFRGRGWRN FVRSNNLKVG DVCLFETTSS SSSKTSKKST NLDVTIFRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	6e-37	B3 family protein