PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026400258.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | NAC | ||||||||
Protein Properties | Length: 478aa MW: 54191.9 Da PI: 6.8383 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 115.1 | 7.3e-36 | 56 | 198 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kv++++ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_026400258.1 56 LPAGVKFDPTDQELI-EHLEAKVQAQNskshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSKHFFHRPSKAYTTGTRKRRKIQtecdlqgg 148 799************.99******9996665443333333666646**********.555666799******************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_026400258.1 149 ETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 198 778************.999***********5547999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 478 aa Download sequence |
MNKNQIVLHA VTVDGSSSFS SSDLIDAKLE EHQLCGTQQC PGCGHKLERK PDWLGLPAGV 60 KFDPTDQELI EHLEAKVQAQ NSKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSKH 120 FFHRPSKAYT TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF 180 GKHRKPEKTN WVMHQYHLGQ LEEEKEGELV VSKIFYQTQP RQCNWTDRAS ASIGEGSTEP 240 SSRRESGSGS CSSSKDIGNN QRDDQLSGGG NTTGISSYSA IDIQQLKSDH FSFVPFRKSF 300 DEVGLMEEVS MARDQASSRQ TLDEHEEISD HQIRQQQHHL AHEVQQQQQQ LQHRQLQVAT 360 SAFHVSRPTH PISTIISPPN LHHTSINVLD EESYHVNRIL LQNDKFQQQQ QQQQQQQQHH 420 HKLGRSSGSG LEEMLIRCTN SSSSDIKEQE SSIPNPQDAE WLKYSFSWAD PDNQDHHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 1e-126 | NAC family protein |