PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026400080.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 781aa MW: 87447 Da PI: 7.3862

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026400080.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	54.8	1.7e-17	587	682	2	94
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 +k+l + dv+++gr+v+pkk ae++ ++ + ++ l++ed + +W++k++y ++ks++yv++ ++ +Fvk ++L++gDf++ ++++ ++++ XP_026400080.1 587 QKELRNTDVGNLGRIVIPKKDAEANlpPLEAKDGIILQMEDmNYSVEWKFKYRYwpNNKSRMYVME-NTGDFVKMHNLQAGDFFIVYREE-NSGK 679 68999********************777778999*8888*****888888889988.******************766.4554 PP .EE CS B3 92 lvv 94 + v XP_026400080.1 680 FIV 682 455 PP

Sequence ? help Back to Top
Protein Sequence Length: 781 aa Download sequence
MDKVISSTQV AYVLKRCIND NIIIAHELVH SMKKSRSKKG CIALKLDMSK AFDRLEWSFL 60 DHMLQSLGFC TKWRELIHQC ISTVQISIKL NGSSCDQYHP SRGLRQRDPL SPYLFIIAIE 120 YLSRSLFLAE KNNLIKGIKM AKDAPPVNHQ LFANDCLLYF QADQRSIYSV LDILSNFGAI 180 SGQMINFSES TTFITGDLSQ QQKLEIINKL GVKQLCKSDK YLGLPFLLGK SKTSSFESIS 240 DAFKNKLSGW NSKLLNQPAR TTMLSSSFSS PVGISEEKPE KFPSGFVGDE FIQEKNRNFD 300 EFGDYRDDRR KFLKSTVPIP VQNLMGSVPP GGGGDAATDS FSRNFMQNNA VLQSQLGTIG 360 GRAELAPIPP KVEISWGQRT VENPCAYQYI PYNDISVSGN ATPNLKRKAE VSTNSCDPAQ 420 MESLFGQFPS GPSKDSGSNY QVLQSGFDPV QALPQNPYFP ITARSQPVNY SPIPPVNLEP 480 TEKQEMDFFA KSWSQWSENS VGGSDASLPV NNRKVVRPRF SSSMSMAVIS DENRNANSEP 540 SAKNGYPLFP EHNALEAFPA FDHPSSSSHR PEAEEETARK GFVLLVQKEL RNTDVGNLGR 600 IVIPKKDAEA NLPPLEAKDG IILQMEDMNY SVEWKFKYRY WPNNKSRMYV MENTGDFVKM 660 HNLQAGDFFI VYREENSGKF IVRGKKGTRP VYAGDTVEMR STAEMRNHGR VVEERELATA 720 HGQLNVEQRY APAGDFFFDL NAGQDMIAPG IPFEFHENTG GLPKSHFLPG PLLNLHQDDV 780 S

Sequence ? help Back to Top

Protein Sequence Length: 781 aa Download sequence

MDKVISSTQV AYVLKRCIND NIIIAHELVH SMKKSRSKKG CIALKLDMSK AFDRLEWSFL  60
DHMLQSLGFC TKWRELIHQC ISTVQISIKL NGSSCDQYHP SRGLRQRDPL SPYLFIIAIE  120
YLSRSLFLAE KNNLIKGIKM AKDAPPVNHQ LFANDCLLYF QADQRSIYSV LDILSNFGAI  180
SGQMINFSES TTFITGDLSQ QQKLEIINKL GVKQLCKSDK YLGLPFLLGK SKTSSFESIS  240
DAFKNKLSGW NSKLLNQPAR TTMLSSSFSS PVGISEEKPE KFPSGFVGDE FIQEKNRNFD  300
EFGDYRDDRR KFLKSTVPIP VQNLMGSVPP GGGGDAATDS FSRNFMQNNA VLQSQLGTIG  360
GRAELAPIPP KVEISWGQRT VENPCAYQYI PYNDISVSGN ATPNLKRKAE VSTNSCDPAQ  420
MESLFGQFPS GPSKDSGSNY QVLQSGFDPV QALPQNPYFP ITARSQPVNY SPIPPVNLEP  480
TEKQEMDFFA KSWSQWSENS VGGSDASLPV NNRKVVRPRF SSSMSMAVIS DENRNANSEP  540
SAKNGYPLFP EHNALEAFPA FDHPSSSSHR PEAEEETARK GFVLLVQKEL RNTDVGNLGR  600
IVIPKKDAEA NLPPLEAKDG IILQMEDMNY SVEWKFKYRY WPNNKSRMYV MENTGDFVKM  660
HNLQAGDFFI VYREENSGKF IVRGKKGTRP VYAGDTVEMR STAEMRNHGR VVEERELATA  720
HGQLNVEQRY APAGDFFFDL NAGQDMIAPG IPFEFHENTG GLPKSHFLPG PLLNLHQDDV  780
S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	5e-38	B3 family protein