PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026397542.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 713aa MW: 80652 Da PI: 5.6156

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026397542.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.8	1.7e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+k+el e+i+evd+yk+ePw+Lp k + +++ ewyfFs+rd+ky++g+r+nrat++gyWkatgkd++v XP_026397542.1 6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EIIPEVDLYKCEPWELPeKsFLPSKDLEWYFFSPRDRKYPNGSRTNRATQAGYWKATGKDRKVN 99 79**************************.99**********95334455777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s k+++vg+kktLv+y+grap+g++tdWvmheyrl XP_026397542.1 100 S-KTRAVGMKKTLVYYRGRAPHGTRTDWVMHEYRL 133 .9999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 713 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEIIPE VDLYKCEPWE LPEKSFLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATQAGYWK ATGKDRKVNS KTRAVGMKKT LVYYRGRAPH 120 GTRTDWVMHE YRLDERECET ASGLQDAYAL CRIFKKSAVG PKTGEQYTTS RSVNPNYNQQ 180 WTSNHQHAHS STIELSSEGR ASDFESSGYP FPSETCSQNV ARGMSTSSSF DFDGLSRDGK 240 WMQYLGDDGF GATTPGFANH GQMPYLPSKV DVALECTRLQ HRLSLPPLQV DDFPEFDFTD 300 SKSQQQQCAV PYRQNTTGPD ILQEILSVAN ASQELINGPN SYQETWAGNY SSYLDEFVMS 360 LPEIGQIDQD HCLVGDISSS IAIYKPWGVE RGRFIDINDL EEEFKTDSKT DSRMVENLRG 420 VGMSPKDLEK TMLEEHKMVP IENVSGFQRR EGEDVIVDTN NNFDQCKEEN SNDFSNPENN 480 GITSERGTTD DFLSMPTFEV YEKIEFKHGM FVSSHQVADT FYHQMEPSKT VTVHLNQVTS 540 HNFPIMKPKA NISTRVKNRS SSSNFGNSKV MGLTQDSAKP TCTFSNLLSI SMKVVIHIGA 600 LLLTTCMYEE HQANNATMLR DEFSTSCKLV IQNRDDEQEY CSSLRQREKV MTLTVGSSHY 660 NSCNSTDDQK SGVCVTDVGE GYNASVLFNK IWSFFATALA IIALGFHHTT CFP

Sequence ? help Back to Top

Protein Sequence Length: 713 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEIIPE VDLYKCEPWE LPEKSFLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATQAGYWK ATGKDRKVNS KTRAVGMKKT LVYYRGRAPH  120
GTRTDWVMHE YRLDERECET ASGLQDAYAL CRIFKKSAVG PKTGEQYTTS RSVNPNYNQQ  180
WTSNHQHAHS STIELSSEGR ASDFESSGYP FPSETCSQNV ARGMSTSSSF DFDGLSRDGK  240
WMQYLGDDGF GATTPGFANH GQMPYLPSKV DVALECTRLQ HRLSLPPLQV DDFPEFDFTD  300
SKSQQQQCAV PYRQNTTGPD ILQEILSVAN ASQELINGPN SYQETWAGNY SSYLDEFVMS  360
LPEIGQIDQD HCLVGDISSS IAIYKPWGVE RGRFIDINDL EEEFKTDSKT DSRMVENLRG  420
VGMSPKDLEK TMLEEHKMVP IENVSGFQRR EGEDVIVDTN NNFDQCKEEN SNDFSNPENN  480
GITSERGTTD DFLSMPTFEV YEKIEFKHGM FVSSHQVADT FYHQMEPSKT VTVHLNQVTS  540
HNFPIMKPKA NISTRVKNRS SSSNFGNSKV MGLTQDSAKP TCTFSNLLSI SMKVVIHIGA  600
LLLTTCMYEE HQANNATMLR DEFSTSCKLV IQNRDDEQEY CSSLRQREKV MTLTVGSSHY  660
NSCNSTDDQK SGVCVTDVGE GYNASVLFNK IWSFFATALA IIALGFHHTT CFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-146	NAC family protein