PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026397517.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 316aa MW: 36703.7 Da PI: 5.885 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.8 | 2.5e-13 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l + + G ++W+t+++ g+ R++k+c++rw +yl XP_026397517.1 14 RGPWTIEEDHKLMHFILNNGIHCWRTVPKLAGLMRCGKSCRLRWINYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53 | 8e-17 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T E+ + ++++ +lG++ W++Ia +++ gRt++++k++w++ XP_026397517.1 67 RGAFTDMEENQMIQLHSRLGNR-WSKIAGHFP-GRTDNEIKNHWNT 110 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 316 aa Download sequence |
MGRQPCCEKV GLKRGPWTIE EDHKLMHFIL NNGIHCWRTV PKLAGLMRCG KSCRLRWINY 60 LRPDLKRGAF TDMEENQMIQ LHSRLGNRWS KIAGHFPGRT DNEIKNHWNT RIKKKLKQLG 120 LDPVTHKPIN NELSHEKCEE VDEEHNSQSN DNTEVDDQEQ SFELKPQSTS NPVPKEIQVM 180 TTQNSNEDMP GLDNGRNTTN NIFPSQEMWW NINYDGFDQT NNMGSSSVDS SVLNPSFSLE 240 DSSLNTNNNY NPNSVGECSS HMQQQQLHQQ NQQQQLEYMY SQTWIDSNVD AFLSWDGFHH 300 FEEVMFPCFQ KSPTIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G14340.1 | 3e-84 | MYB family protein |