PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026397508.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 423aa MW: 47257.3 Da PI: 9.5781 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.8 | 9.1e-17 | 132 | 177 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v q+G+ +W++I+++++ gR++k+c++rw++ XP_026397508.1 132 RGHWRPAEDSKLKELVSQYGPQNWNLISEKLQ-GRSGKSCRLRWFNQ 177 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 52.2 | 1.4e-16 | 184 | 227 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l+ a++++G++ W+ I+r ++ gRt++ +k++w+ XP_026397508.1 184 RRAFSEEEEERLLAAHRLYGNR-WAMISRLFP-GRTDNGVKNHWHV 227 678*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 423 aa Download sequence |
MTLQQPQQNL QKSSGGDESS YFRRRFQEIN FLSSRPSSPT SLSLSFGPFS SSSSPSKDKS 60 MMSKSSDLSF QVMGGSNDEQ NIKSWSFQTT SEETAIKNEM PCNADYQKQQ DSESFGHGSN 120 QQSTSSVHSI ARGHWRPAED SKLKELVSQY GPQNWNLISE KLQGRSGKSC RLRWFNQLDP 180 RINRRAFSEE EEERLLAAHR LYGNRWAMIS RLFPGRTDNG VKNHWHVIMA RKQREQSNNL 240 SRRSSRKPFP PIPTASTTTY DHQTLLMMKH ADLKLISSYH QKNAAAGGAG ARSESTITTK 300 DDQSTSTCTN LSLNSSSAAR TQPISPNQML FDFQMGPSEE NMMSFSSGCL YSEKTKTGIS 360 KHDSYPMKMV IGLDHHPSGG YSDSNSEISA NDSSVHKRGR RNLNTGDNEA LPFIDFLGVG 420 TTA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 2e-67 | MYB family protein |