PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026397470.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NF-YA
Protein Properties Length: 330aa    MW: 36239.8 Da    PI: 8.1279
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026397470.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA100.71.4e-31173228258
       CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                      p++VNaKQy++Il+RRq+Rakle++++l  k rkpylheSRh hA++R RgsgGrF
  XP_026397470.1 173 GPIFVNAKQYHAILRRRQTRAKLEAQNRL-VKPRKPYLHESRHLHAVKRVRGSGGRF 228
                     59***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MQNIQGNDSH QFSSHPASPS VVNSCSRSWW NSSVSQIPPS SMSRSTSLNV DTPPQHCQNA  60
NQLGSQQKDQ DSSSSQSTIQ SHHEMATIAG HAENNGRQEE AQAKSFATQA TPYFSLPPSQ  120
IDFNQSTTHL PYPYADPYYG AMVAAYGAQP VMLPDMVGNP TRVPLPVEVA EAGPIFVNAK  180
QYHAILRRRQ TRAKLEAQNR LVKPRKPYLH ESRHLHAVKR VRGSGGRFLK QQTDASSPPN  240
VENTSELASQ QTRGNLLESE IRQSEPANPV APTTLYSDTT CVSYSEAPDH RLFSGYNHLQ  300
RLGSTSSQDS GSGDGMSYNG YQQFGIPVTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.12e-40NF-YA family protein