PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026397359.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 336aa MW: 38264.4 Da PI: 5.5311

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026397359.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.2	1.6e-12	33	78	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W +eEde+l +v ++G+++W++I ++ + Rt+k+c++rw + XP_026397359.1 33 KGPWMAEEDEILMAYVDKYGPRDWSSIRSKGLLPRTGKSCRLRWVN 78 79***********************8876677********87 PP
2	Myb_DNA-binding	42.8	1.2e-13	89	129	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++++eE+ + +d+ +++G++ W++Ia +++ gRt++++k++w XP_026397359.1 89 KFSAEEERIVIDLQARFGNK-WARIATYLQ-GRTDNDVKNFWS 129 79****************.*****.*********5 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MKKKRVESGF GKEMDGIIRQ NKRDREDGVV MRKGPWMAEE DEILMAYVDK YGPRDWSSIR 60 SKGLLPRTGK SCRLRWVNKL KPDLKTGCKF SAEEERIVID LQARFGNKWA RIATYLQGRT 120 DNDVKNFWST RQKRLARILQ TPTMSKSQKN NGKFHGLPSL EPPNLCPTTM QEESASMSNS 180 CQPSMSNSSQ PSCYMGNNVP IKMVALPDLV KQNNLNNMEI LPELELPSTT ETKPFSDHPQ 240 PLQFSFPQLP EPELDIPLLS ENQNLDLDVF GRGEISEPEN GSHFPLDLPF FGLGNADRDL 300 VKGSSINTET PDSFFDDFPP DMFDYMEPPL PSSFHW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	3e-62	MYB family protein