PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026396776.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 289aa MW: 33180.7 Da PI: 9.6953

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026396776.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.3	6.2e-17	37	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ +Ed+llv++v+++G + W+ Ia+ +g +R +kqc++rw+++l XP_026396776.1 37 KGNWSLDEDQLLVRLVQEYGVKKWAFIASLIG-RRIGKQCRERWFNHL 83 79****************************.***********97 PP
2	Myb_DNA-binding	54.3	3.2e-17	89	132	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r++WT +E+ lv+a+ +G++ W+ Ia++++ gRt++++k++w++ XP_026396776.1 89 RDAWTLDEEIALVEAHSAMGNR-WAEIAKRIP-GRTENSIKNHWNT 132 789*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MEPGAEEGKE MFRKELTSLM KKQYFPVNKT AGRVVIKGNW SLDEDQLLVR LVQEYGVKKW 60 AFIASLIGRR IGKQCRERWF NHLRPDIKRD AWTLDEEIAL VEAHSAMGNR WAEIAKRIPG 120 RTENSIKNHW NTTWRRQMNK RKSRRSTGNG RTTTVLQEYI RTIALAGQKG LEKPKRKVNP 180 KLLLLKDKED QGKECSKNGI PDMPVSSSAL NGDMINVRME NNIADDPNDG VFDDMDLTSL 240 LQWPSASSSS YDFLPSFYDN SFSNELGNLK NELDLVEMLA TSMNIDNQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	8e-47	MYB family protein