PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026396633.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 355aa MW: 41089.3 Da PI: 9.3039

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026396633.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.9	7.2e-16	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd+ll +++k++G g W+ ++ + g++R++k+c++rw++yl XP_026396633.1 15 KGAWAEEEDQLLRECIKKYGQGKWHQVPLRAGLNRCRKSCRLRWLNYL 62 799*******************************************97 PP
2	Myb_DNA-binding	45.3	2.1e-14	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + ++E +l+++ +k+lG++ W++Ia +++ gRt++++k++++++l XP_026396633.1 68 RGEFKPDETDLIIRMHKLLGNR-WSLIAGRLP-GRTANDIKNYFNTHL 113 899*****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MEDSSTVFSK RGVRKGAWAE EEDQLLRECI KKYGQGKWHQ VPLRAGLNRC RKSCRLRWLN 60 YLHPNIKRGE FKPDETDLII RMHKLLGNRW SLIAGRLPGR TANDIKNYFN THLKKTCFSK 120 YNTEKAQQDA VTKKLCHDNT THRDGHEQQK FLKCRQLCPN ISTIYHTDMR MTQVLRPQPQ 180 TFSKKYQWRM MNKAPTPTGT NNNSITATAR FPNNAQVVNN ATRLSLLVDD HHDQFSPING 240 QHIHDQGTNW LKNILLGETE EEDSKKMKKP KKKKPITLTE NASLEFENTT TSGVEQGMST 300 KDMDGDGDAY HCSLDGDQKL KEGGNAGDND NYWNSYLDDN LWSMLREEQN HHLMI

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MEDSSTVFSK RGVRKGAWAE EEDQLLRECI KKYGQGKWHQ VPLRAGLNRC RKSCRLRWLN  60
YLHPNIKRGE FKPDETDLII RMHKLLGNRW SLIAGRLPGR TANDIKNYFN THLKKTCFSK  120
YNTEKAQQDA VTKKLCHDNT THRDGHEQQK FLKCRQLCPN ISTIYHTDMR MTQVLRPQPQ  180
TFSKKYQWRM MNKAPTPTGT NNNSITATAR FPNNAQVVNN ATRLSLLVDD HHDQFSPING  240
QHIHDQGTNW LKNILLGETE EEDSKKMKKP KKKKPITLTE NASLEFENTT TSGVEQGMST  300
KDMDGDGDAY HCSLDGDQKL KEGGNAGDND NYWNSYLDDN LWSMLREEQN HHLMI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	5e-61	MYB family protein