PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026395480.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 867aa    MW: 95270.1 Da    PI: 6.7184
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026395480.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.41.2e-183896357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_026395480.1 38 KYVRYTPEQVEALERVYIECPKPSSLRRQQLVRECpilsNIEPKQIKVWFQNRRCREKQ 96
                    6789*****************************************************97 PP
2START161.46.7e-511863932204
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++++++ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W +++++ e+l v  +g  g+++l+
  XP_026395480.1 186 IAEETLTQFLAKATGTAVDWVQMLGMKPGPDSIGIVAVSHNCSGVAARACGLVSLEPM-KVAEILKDRPSWFHDCRSLEILSVQPTGngGTIELI 279
                     68999*****************************************************.8888888888***************99999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++++a+++lv+ Rd++++Ry+  l++g++vi+++S+++ +  +     +s+vRae+l Sg+li+p+++g+s +++v+hv+l++++++++lr+l+
  XP_026395480.1 280 YMQTYAPTTLVSaRDYWTLRYTTGLEDGSLVICERSLTPSNGGSGgppAPSFVRAEMLSSGYLIRPCDGGGSMIHIVDHVNLDAWSVPEVLRPLY 374
                     ****************************************99887888*********************************************** PP

                     HHHHHHHHHHHHHHTXXXX CS
           START 186 ksglaegaktwvatlqrqc 204
                     +s  + ++k++ a+l++ +
  XP_026395480.1 375 ESPKILAQKMTIAALRYIR 393
                     **************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 867 aa     Download sequence    
MALSMYNHHH HNNNNQREPS STSLKQQQQQ QQQMDTSKYV RYTPEQVEAL ERVYIECPKP  60
SSLRRQQLVR ECPILSNIEP KQIKVWFQNR RCREKQRTEA SRLQTVNRKL TAMNKLLMEE  120
NDRLQKQVSQ FVYENGYMKT QLTNASAVTT DTSCESVVTS GQRQQQQNPT LHPPRDANNP  180
AGLLAIAEET LTQFLAKATG TAVDWVQMLG MKPGPDSIGI VAVSHNCSGV AARACGLVSL  240
EPMKVAEILK DRPSWFHDCR SLEILSVQPT GNGGTIELIY MQTYAPTTLV SARDYWTLRY  300
TTGLEDGSLV ICERSLTPSN GGSGGPPAPS FVRAEMLSSG YLIRPCDGGG SMIHIVDHVN  360
LDAWSVPEVL RPLYESPKIL AQKMTIAALR YIRQISQEMS GEIRHSGGRQ PAVLRTFSQR  420
LCRGFNDAVN GFADDGWSVL GSDGVEDVTI AINSSSSKLP CSQGNSSTML SILGGGVVCA  480
KASMLLKNVP PALLVRFLRE HRSEWADYGV DAYAAASMKS SPYSIPGARP SNFSSNFPSS  540
HVVIPLAHTL ENEEALEVVR LESRGFSQDG VLSRDMYLLQ LCSGVDENAA GSCAQLVFAP  600
IDESFPDDAP LLPSGFRVIP LEPKTDSRTA SRTLDLASTL EAGAGGSRPS SDDNNELKSV  660
LTIAFQFTYE NHSRDDVIAM ARQYVRSIVG SVQRVAMAIS PSRLNSTLGP KTLAGSPEAV  720
TLARWISRSY RFHTGMELLL SDPQASGDSL LKSLWHHSDA IMCCSMKSNA SPVFTFANQA  780
GLDLLETTLV ALQDIMLDKV LDETGRKTLC SEFSKIMHQG YSQLPAGICV SSMGRPVSYD  840
QAIAWKVLDD DGTNHCLAFM FMNWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein