PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026395343.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 673aa MW: 76292.6 Da PI: 8.6151

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026395343.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.4	3.2e-08	484	524	2	39
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkq 39 ++W++eE ell ++++++++g +W+ I++++g+gR+ + XP_026395343.1 484 KPWSKEEVELLRKGIQKFPKGtsrRWEVISEYIGTGRSVDE 524 58**********************************99765 PP
2	Myb_DNA-binding	22.5	2.6e-07	618	660	3	43
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 +W++ + lv+a k + ++ +W +I++ ++ g+t qck + XP_026395343.1 618 AWSAVQERALVQALKTFTKEtnqRWQRISAAVP-GKTVVQCKKK 660 7***************99*********.******86 PP

Sequence ? help Back to Top
Protein Sequence Length: 673 aa Download sequence
MVTQPKLRLI CYSNELIDGQ PIYASSNAFP AKALNREPAG HSFHSAALLL CGFGKEEKEV 60 QADDQNVSSD QSESYFASSE SYSSKGKKKP GSGKDQQDHY ALLGLGHLRF LATEDQIKKS 120 YRETALKHHP DKQASLLLGE LTEAAKEAKK DDIENHFKAI QVAYEVLMDP VKRRVYDSTD 180 EFDDEVPADC SPQNFFKVFG PAFMRNGRWS VVQPVPSLGE ENSPLKEVDS FYDFWYGFKS 240 WREFPHSDEY DLEEAETRDD KRWMERQNSK LREKARKEEH ARVRSLVDNA YKKDPRIARR 300 KEEEKAEKQK KKEAKYLAKK LQEEEAARAA EEERLRKEEE DRQAALAASN QKKIKEKEKK 360 LLRKERARLR TVSAVVVSER SYKVTEDDVE SLCMSFDIDQ LKSLCSELEQ KSEACGRARL 420 LKDALGRTDE ECIDVKKVEM KNQQPNGYHE TDIKKVEVKN QLPNGSSVQV KVENPLQSYE 480 KKDKPWSKEE VELLRKGIQK FPKGTSRRWE VISEYIGTGR SVDEILKATK TVLLQKPDSA 540 KAFDSFLEKR KAAPSIASPL TTRQESEGIV SSPTNGPDAN GHKSVSPEKS SSVSNGGQQS 600 SESEIDSNGV SSGVNGEAWS AVQERALVQA LKTFTKETNQ RWQRISAAVP GKTVVQCKKK 660 VASMKESFRN NKN

Sequence ? help Back to Top

Protein Sequence Length: 673 aa Download sequence

MVTQPKLRLI CYSNELIDGQ PIYASSNAFP AKALNREPAG HSFHSAALLL CGFGKEEKEV  60
QADDQNVSSD QSESYFASSE SYSSKGKKKP GSGKDQQDHY ALLGLGHLRF LATEDQIKKS  120
YRETALKHHP DKQASLLLGE LTEAAKEAKK DDIENHFKAI QVAYEVLMDP VKRRVYDSTD  180
EFDDEVPADC SPQNFFKVFG PAFMRNGRWS VVQPVPSLGE ENSPLKEVDS FYDFWYGFKS  240
WREFPHSDEY DLEEAETRDD KRWMERQNSK LREKARKEEH ARVRSLVDNA YKKDPRIARR  300
KEEEKAEKQK KKEAKYLAKK LQEEEAARAA EEERLRKEEE DRQAALAASN QKKIKEKEKK  360
LLRKERARLR TVSAVVVSER SYKVTEDDVE SLCMSFDIDQ LKSLCSELEQ KSEACGRARL  420
LKDALGRTDE ECIDVKKVEM KNQQPNGYHE TDIKKVEVKN QLPNGSSVQV KVENPLQSYE  480
KKDKPWSKEE VELLRKGIQK FPKGTSRRWE VISEYIGTGR SVDEILKATK TVLLQKPDSA  540
KAFDSFLEKR KAAPSIASPL TTRQESEGIV SSPTNGPDAN GHKSVSPEKS SSVSNGGQQS  600
SESEIDSNGV SSGVNGEAWS AVQERALVQA LKTFTKETNQ RWQRISAAVP GKTVVQCKKK  660
VASMKESFRN NKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	0.0	MYB family protein