PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026395126.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 634aa MW: 72971.5 Da PI: 7.8374

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026395126.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	27.4	1.1e-08	85	164	16	90
FAR1 16 kskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +s+skk + +g+ + t+ C ++g +++kkk e ++r++ + ++gC +lk + +kw + + HnHel+ XP_026395126.1 85 ISHSKK-TLKGKGSRITLGCERSGWYTDHKKKslqpkpPEPRKRKSRTRKCGCPFQLKCDWVEGNKWTLRAVCGRHNHELS 164 445444.47777899*******99999999999998888888999999******999**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 634 aa Download sequence
MVDGPINSSP CMEIIPSVGS PQLDVDPGVD GPQLVETTSI TETYSQPVTV DLTPFFVTDQ 60 VFDSREAIIE WCQEVGKKNN TVLVISHSKK TLKGKGSRIT LGCERSGWYT DHKKKSLQPK 120 PPEPRKRKSR TRKCGCPFQL KCDWVEGNKW TLRAVCGRHN HELSDTLTGH AYAGRLKEEE 180 KQLVLHLTAT GVPPQQVLIA LKEKSKENYS TLKTIYNVKS KHRKSQVEGK SAMQQVMELL 240 ARYHYVEKHR SNEETNEVRD IFWAHPESML LAKCFPSVLM VDSTCKTNRF KMPLIHIVGI 300 SSTGKLFTVA FAFMEADTEQ HYIWALTQLK WMYMPNTLPS LLVTDRESAL VNAIDIVFPR 360 SSRLLCTWHL NQQVQANCEK AFEDNDEWEQ FHTDWNHVWQ AETMDEYGDA YADFATKWAP 420 KYPSCIVYLR DTWLIQKEKF ALAWTNKIKH FGNTTTKADK EHENLRKYLV SAVDSYSTCW 480 KAMHNMIKDE IAQIKFSFEL SLTTLNQEHL SPALEELRNH VSHKALELVL FEIHRAENLG 540 NEESSCSCFL HSTHGLPCAH ELVKYVPQGK AIPLLNIDSH WKQLSIVPTQ ELYNGFDVLP 600 EFQLLRQKWR EAVEPRRSLL LQKIKDIATF KPRN

Sequence ? help Back to Top

Protein Sequence Length: 634 aa Download sequence

MVDGPINSSP CMEIIPSVGS PQLDVDPGVD GPQLVETTSI TETYSQPVTV DLTPFFVTDQ  60
VFDSREAIIE WCQEVGKKNN TVLVISHSKK TLKGKGSRIT LGCERSGWYT DHKKKSLQPK  120
PPEPRKRKSR TRKCGCPFQL KCDWVEGNKW TLRAVCGRHN HELSDTLTGH AYAGRLKEEE  180
KQLVLHLTAT GVPPQQVLIA LKEKSKENYS TLKTIYNVKS KHRKSQVEGK SAMQQVMELL  240
ARYHYVEKHR SNEETNEVRD IFWAHPESML LAKCFPSVLM VDSTCKTNRF KMPLIHIVGI  300
SSTGKLFTVA FAFMEADTEQ HYIWALTQLK WMYMPNTLPS LLVTDRESAL VNAIDIVFPR  360
SSRLLCTWHL NQQVQANCEK AFEDNDEWEQ FHTDWNHVWQ AETMDEYGDA YADFATKWAP  420
KYPSCIVYLR DTWLIQKEKF ALAWTNKIKH FGNTTTKADK EHENLRKYLV SAVDSYSTCW  480
KAMHNMIKDE IAQIKFSFEL SLTTLNQEHL SPALEELRNH VSHKALELVL FEIHRAENLG  540
NEESSCSCFL HSTHGLPCAH ELVKYVPQGK AIPLLNIDSH WKQLSIVPTQ ELYNGFDVLP  600
EFQLLRQKWR EAVEPRRSLL LQKIKDIATF KPRN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	128	KKKSLQPKPPEPRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-20	FAR1 family protein