PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026394820.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 488aa MW: 54607.9 Da PI: 6.6197

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026394820.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.4	1.4e-12	437	486	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 + +W+ +E++ l dav+++G g+W++I ++ + Rt+ ++k++w++ XP_026394820.1 437 KRKWSLQEEQALRDAVTKHGRGNWTLILNKNRdvfEDRTAGDLKDKWRNM 486 579*********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MDPDIAGVIM EFLVRVPTLE DSIIKTLLEK LPIRKDDHRL IKCILLRKLS VESSKGQVSE 60 NTLETLERIE ESDYTQGVST LDSMSEAYCS VAVHCAVVHL KKIPIDFHSY LDAVVRIWRG 120 RIHDMEKREG VSLYSDKLKE MRCVIEEALW NGSVRERVLT WDTQGDAVRL VKVFLEDAMK 180 QLGPSMIEIA VSSLTAKGKE VFIPPSNLLS KHPEDGRVSD APHCDVHVHE SNLGNDGNDV 240 ALGSGMEISH AVNAKNNLPT PEIEIVKEAR KTSTADLQSV VEETLPRASK RKYNLSTPEV 300 KTVQEALKSS LSDLQAMVKD PLPDALRVAK AISASIAREA TTQQNFVLVD EGGEASCAPS 360 VDKGVTSAEA NETRNQNTTT RPSLMGRNST AHTYEWNEDS IESSQERSPD HPHLPTPRRV 420 VVSPLVKHEV GNHKRMKRKW SLQEEQALRD AVTKHGRGNW TLILNKNRDV FEDRTAGDLK 480 DKWRNMTR

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MDPDIAGVIM EFLVRVPTLE DSIIKTLLEK LPIRKDDHRL IKCILLRKLS VESSKGQVSE  60
NTLETLERIE ESDYTQGVST LDSMSEAYCS VAVHCAVVHL KKIPIDFHSY LDAVVRIWRG  120
RIHDMEKREG VSLYSDKLKE MRCVIEEALW NGSVRERVLT WDTQGDAVRL VKVFLEDAMK  180
QLGPSMIEIA VSSLTAKGKE VFIPPSNLLS KHPEDGRVSD APHCDVHVHE SNLGNDGNDV  240
ALGSGMEISH AVNAKNNLPT PEIEIVKEAR KTSTADLQSV VEETLPRASK RKYNLSTPEV  300
KTVQEALKSS LSDLQAMVKD PLPDALRVAK AISASIAREA TTQQNFVLVD EGGEASCAPS  360
VDKGVTSAEA NETRNQNTTT RPSLMGRNST AHTYEWNEDS IESSQERSPD HPHLPTPRRV  420
VVSPLVKHEV GNHKRMKRKW SLQEEQALRD AVTKHGRGNW TLILNKNRDV FEDRTAGDLK  480
DKWRNMTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06910.1	2e-12	MYB_related family protein