PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026394369.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 536aa    MW: 60987.3 Da    PI: 9.7868
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026394369.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.49e-121298196
                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
                    ffkv+    ++k++ l +p +f+ +++g    + + +l+++ g sW+vk+  r   ++   ++kGW +Fv+a+ L  gDfv+ k++g+s+f   vk+
  XP_026394369.1 12 FFKVM--FGNFKKK-LKIPVNFIGKFKGM--IPYDSILRSPLG-SWNVKI--REEENGgLSFRKGWLDFVEAHYLGHGDFVTMKYIGDSQF--AVKL 98
                    55666..4556665.99999999999554..456778888776.8*****..55444449****************************999..6655 PP
2B345.31.6e-142062831295
                     HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     k+ ++ +pkk + ++g     s  + l+d +gr W+v+l  +++ g++++ kGWkeF++ + L++g ++ ++++g+s+f  +v 
  XP_026394369.1 206 KKYQMEIPKKVVMKIGRT--LSDIVALKDANGRIWNVEL--KRSEGKVWFYKGWKEFAEHHSLRDGYTLGISYNGNSQF--CVC 283
                     667899******999855..8889***************..*********************************99999..544 PP
3B350.63.5e-16434528199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ff v +++++l+++ l +pk+f ++h  +k+  k ++++++++++W++ +++r++  +  +++GW +  +  gL +gD++vF+l   +++e++v+
  XP_026394369.1 434 FFAVYMRASYLTNAYLHIPKSFSRKHL-PKTI-KNVMVRSSDNKVWTLGYCIRGYATQ--FSNGWTSLRRHLGLTAGDVIVFELLTGKDKEMRVS 524
                     889999********************4.4444.58***************77777766..89*********************99779999**** PP

                     EE-S CS
              B3  96 vfrk 99 
                     ++r+
  XP_026394369.1 525 IIRE 528
                     9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 536 aa     Download sequence    
MGAQRDYSRP SFFKVMFGNF KKKLKIPVNF IGKFKGMIPY DSILRSPLGS WNVKIREEEN  60
GGLSFRKGWL DFVEAHYLGH GDFVTMKYIG DSQFAVKLYG MNGCEKVLPS TSSNGVKSTP  120
SRKRKEYGET SKGKFTDYGS EADHHKYHAS NSGRYSFCSD KRNGGLFKCD APKRKSTVNE  180
GRTRVDQAEC SRKGQPYFLV IWTENKKYQM EIPKKVVMKI GRTLSDIVAL KDANGRIWNV  240
ELKRSEGKVW FYKGWKEFAE HHSLRDGYTL GISYNGNSQF CVCVTNFMEH LEDSGNQGES  300
NPKKRCRLSK REEDDDVIWE DTPPSRTHVE SKTNEEKPSL SVPAGLDIPM QLNKDKGKKS  360
LVSDETSSPC LGNEKTPSGE CPPTLPVVKE EESEETSDSP DAPKLFHKSS RRAEGNERVA  420
EVTKLFKSQT QYPFFAVYMR ASYLTNAYLH IPKSFSRKHL PKTIKNVMVR SSDNKVWTLG  480
YCIRGYATQF SNGWTSLRRH LGLTAGDVIV FELLTGKDKE MRVSIIREID NVLTKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-30B3 family protein