PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026393728.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 1293aa MW: 146289 Da PI: 7.3126

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026393728.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.9	1.7e-23	104	233	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.........................................tekerrtr 55 fYneYA vGFsvrk+k++ks+ +g+ r+f+Cskeg+++++ ++ +++ + + XP_026393728.1 104 FYNEYAAIVGFSVRKDKTRKSNIDGSYLFRRFCCSKEGYPRKSLENggngvntnigigmqvkdgmlvkmeaariqpvprvgrrakldMKRRAEIQ 198 9****************************************999**********************************98767777788 PP FAR1 56 aetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + r+gC+a+l vk+++dg+w v+k+++eHnHe++ XP_026393728.1 199 QRMRVGCNARLDVKRTTDGRWIVQKFVEEHNHECV 233 999***************************986 PP
2	FAR1	78.1	1.7e-24	291	392	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 fYn+YA+++GF vrk+k+++s+ +g+ r+++Cskeg+r+++ ++ + + r ++tr+gC+akl+vkk++dgkw+v+k+ + XP_026393728.1 291 FYNAYARTLGFVVRKDKTRRSNIDGSLLFRRLCCSKEGYRRKNCENddndrkqmiggviVKVRTRILPVTRVGCNAKLEVKKSTDGKWVVQKFIE 385 9**************************************999988899999999987777777889*********************** PP FAR1 84 eHnHela 90 eHnH+l XP_026393728.1 386 EHNHKLD 392 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1293 aa Download sequence
MEESTSQFDS LGADENEIFG DVAEAECELV LGVDKVVSPT HDTATDNNNT QNHSHCDTHS 60 HDTTDNTTHD HVHNREEATT SSSTCFTKPF VGMEFETLQK AFLFYNEYAA IVGFSVRKDK 120 TRKSNIDGSY LFRRFCCSKE GYPRKSLENG GNGVNTNIGI GMQVKDGMLV KMEAARIQPV 180 PRVGRRAKLD MKRRAEIQQR MRVGCNARLD VKRTTDGRWI VQKFVEEHNH ECVSLDETHL 240 LRSHRSRRAA RALLDRNGVG GLPSSEERII NEVPKPSVGM EFESPHKAYL FYNAYARTLG 300 FVVRKDKTRR SNIDGSLLFR RLCCSKEGYR RKNCENDDND RKQMIGGVIV KVRTRILPVT 360 RVGCNAKLEV KKSTDGKWVV QKFIEEHNHK LDRLGDMLLF KTHKLDEPDQ EELLDSVTDG 420 SARPKKVSSY IMSEAGGSEK ISFIEARLRN RMKKKKRRKL EKGDTQIILN YFRQMQAENP 480 AFFYAIQVDE EDQMSSCFWA DARSRSDFGH FGDVVYFETT YGANTCGRPF TPLLGVNNHL 540 QAVLFGCAII LNETEESFAW LLETLLKAMY GRHPVTVITD QDAEMEKAIG QLLPGTNHSL 600 SLWHILQNTA KNLSHLYNKD DIFSTDFKNC IYEPQLCEEF ESRWESLLDK FDLRDNEWLG 660 YLYIRRHKWV PVYAKHIFHA HTMSIERNES MHSFFKGYVL SKALPMTEFI NQYEKAIFDS 720 RKKETYEDSI SRQTRPVLKS ELPLEKQAAE SYTRLVFQEF HKEFTDSFNY MAVETETLGT 780 IKMFLVSRWG QNSNWMVKFD SCDNDTKVTC SCQNFESAGI LCRHILKVFT ATNVMLIPDV 840 YIRKRWTKRA KCGMPSHKNE SVAGSECESS FALRYRNLCQ LALTLSAKGA LSFKAYQTAS 900 CAVEMKLREV EKVPEGDIIV SRLDVQGTSA SHSPIEAVNN NEISNRLVCE DNPTVASGSQ 960 IASSDPPRVR PRGRPPKKVM PSLLENHRKK KARTEPESSE HNGVHSHPRN EAIASEPIVP 1020 CNFGGKDGQE AHNSTRLSTL CPNICVYVPG PAGDLNDQYH STDTSGFGEP FAGLSCIQSS 1080 EHNIFDLNQE LTVGPASIPN PQTFQELTVG PASIPNPQTS HFDLNHQVNH VARPPLDSRV 1140 LPSSGWFKLN FGGCSKEIYF EDSDRRRIGG YGGAVSLSDG SIIKSYAGSA AEVQAVEAEI 1200 LGLWNGLKLL SALPSGPVWI EGDSEHVIKW LRRESEIPWR FTPMFFEIEA IMSRLVLGRI 1260 THIHQEGNSV AGKLANEGLS KDSLVIWDQM PSL

Sequence ? help Back to Top

Protein Sequence Length: 1293 aa Download sequence

MEESTSQFDS LGADENEIFG DVAEAECELV LGVDKVVSPT HDTATDNNNT QNHSHCDTHS  60
HDTTDNTTHD HVHNREEATT SSSTCFTKPF VGMEFETLQK AFLFYNEYAA IVGFSVRKDK  120
TRKSNIDGSY LFRRFCCSKE GYPRKSLENG GNGVNTNIGI GMQVKDGMLV KMEAARIQPV  180
PRVGRRAKLD MKRRAEIQQR MRVGCNARLD VKRTTDGRWI VQKFVEEHNH ECVSLDETHL  240
LRSHRSRRAA RALLDRNGVG GLPSSEERII NEVPKPSVGM EFESPHKAYL FYNAYARTLG  300
FVVRKDKTRR SNIDGSLLFR RLCCSKEGYR RKNCENDDND RKQMIGGVIV KVRTRILPVT  360
RVGCNAKLEV KKSTDGKWVV QKFIEEHNHK LDRLGDMLLF KTHKLDEPDQ EELLDSVTDG  420
SARPKKVSSY IMSEAGGSEK ISFIEARLRN RMKKKKRRKL EKGDTQIILN YFRQMQAENP  480
AFFYAIQVDE EDQMSSCFWA DARSRSDFGH FGDVVYFETT YGANTCGRPF TPLLGVNNHL  540
QAVLFGCAII LNETEESFAW LLETLLKAMY GRHPVTVITD QDAEMEKAIG QLLPGTNHSL  600
SLWHILQNTA KNLSHLYNKD DIFSTDFKNC IYEPQLCEEF ESRWESLLDK FDLRDNEWLG  660
YLYIRRHKWV PVYAKHIFHA HTMSIERNES MHSFFKGYVL SKALPMTEFI NQYEKAIFDS  720
RKKETYEDSI SRQTRPVLKS ELPLEKQAAE SYTRLVFQEF HKEFTDSFNY MAVETETLGT  780
IKMFLVSRWG QNSNWMVKFD SCDNDTKVTC SCQNFESAGI LCRHILKVFT ATNVMLIPDV  840
YIRKRWTKRA KCGMPSHKNE SVAGSECESS FALRYRNLCQ LALTLSAKGA LSFKAYQTAS  900
CAVEMKLREV EKVPEGDIIV SRLDVQGTSA SHSPIEAVNN NEISNRLVCE DNPTVASGSQ  960
IASSDPPRVR PRGRPPKKVM PSLLENHRKK KARTEPESSE HNGVHSHPRN EAIASEPIVP  1020
CNFGGKDGQE AHNSTRLSTL CPNICVYVPG PAGDLNDQYH STDTSGFGEP FAGLSCIQSS  1080
EHNIFDLNQE LTVGPASIPN PQTFQELTVG PASIPNPQTS HFDLNHQVNH VARPPLDSRV  1140
LPSSGWFKLN FGGCSKEIYF EDSDRRRIGG YGGAVSLSDG SIIKSYAGSA AEVQAVEAEI  1200
LGLWNGLKLL SALPSGPVWI EGDSEHVIKW LRRESEIPWR FTPMFFEIEA IMSRLVLGRI  1260
THIHQEGNSV AGKLANEGLS KDSLVIWDQM PSL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	453	458	KKKKRR
2	453	459	KKKKRRK
3	453	460	KKKKRRKL
4	454	459	KKKKRR
5	454	459	KKKRRK
6	455	459	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-143	FAR1 family protein