PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026393408.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 691aa MW: 76974.1 Da PI: 4.7435

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026393408.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.2	5.1e-10	523	565	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rW++++ +l++++++q+G++ +++I + ++ gR + q+ks++ k XP_026393408.1 523 ERWSKQDTDLFYEGIQQFGTD-FTLIQQLFP-GRARAQVKSKYKK 565 69*****************.*****.*********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 691 aa Download sequence
MDLDDLLSEP VVVNSRARVK FQPKARPKSN VKVATVSAAG QCDSSKDKPD ALSGTPLLGH 60 ALSSTEALQQ ECSVSADGKI SGLVDVSTQL ATRKDEIAID PMFPGNTNTM DSCGDKQAGF 120 ERSRGETADI FSELESLDTL SQSAISNVST MRKFQPKVII DAKPRNKHPV SRPIISEAAC 180 SISCRDTPSH QGYTISEEGL ASIASAPTAS VSPSVNNNPE FLVVPQDVFK SREAASPDNH 240 GDRVSWMDDR RLEKEVEAFD NLTSETTPNM GNVHLVRPVN QYLEEDLTPA TKDLENYAEI 300 SFPNVVSHED FGVSQAGHMI SRKEDYQPIL AASKEIEIGR SSRQLRNKVV PLVATDEIAE 360 DFTVNENDDN DESFNGNDNP NLKNTCQTSK KLAPGLEKTG SGRRKAAEGS ETLNKEPPKK 420 KFSHSTRRNK RRVDKVLLET PEDEINPRKL MLKDLILLAE AKERLLVADP NAANNSSPCQ 480 STTFTQDTHF EEEVPFAYEE DQAERFVQPK LNYHTFMNKT STERWSKQDT DLFYEGIQQF 540 GTDFTLIQQL FPGRARAQVK SKYKKEEQQH PKRLFDALTN RSKNHSHFEL VIERLQKAAA 600 DAEAEHGSDR DDESVGITGE EVEITPNTNE EVSKKPDENK KNFEEEEVGE GMMEAEQVAI 660 MNHQGHSPAK SHQESEEGDV YDIWSEYKSD I

Sequence ? help Back to Top

Protein Sequence Length: 691 aa Download sequence

MDLDDLLSEP VVVNSRARVK FQPKARPKSN VKVATVSAAG QCDSSKDKPD ALSGTPLLGH  60
ALSSTEALQQ ECSVSADGKI SGLVDVSTQL ATRKDEIAID PMFPGNTNTM DSCGDKQAGF  120
ERSRGETADI FSELESLDTL SQSAISNVST MRKFQPKVII DAKPRNKHPV SRPIISEAAC  180
SISCRDTPSH QGYTISEEGL ASIASAPTAS VSPSVNNNPE FLVVPQDVFK SREAASPDNH  240
GDRVSWMDDR RLEKEVEAFD NLTSETTPNM GNVHLVRPVN QYLEEDLTPA TKDLENYAEI  300
SFPNVVSHED FGVSQAGHMI SRKEDYQPIL AASKEIEIGR SSRQLRNKVV PLVATDEIAE  360
DFTVNENDDN DESFNGNDNP NLKNTCQTSK KLAPGLEKTG SGRRKAAEGS ETLNKEPPKK  420
KFSHSTRRNK RRVDKVLLET PEDEINPRKL MLKDLILLAE AKERLLVADP NAANNSSPCQ  480
STTFTQDTHF EEEVPFAYEE DQAERFVQPK LNYHTFMNKT STERWSKQDT DLFYEGIQQF  540
GTDFTLIQQL FPGRARAQVK SKYKKEEQQH PKRLFDALTN RSKNHSHFEL VIERLQKAAA  600
DAEAEHGSDR DDESVGITGE EVEITPNTNE EVSKKPDENK KNFEEEEVGE GMMEAEQVAI  660
MNHQGHSPAK SHQESEEGDV YDIWSEYKSD I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	2e-42	MYB_related family protein