PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026392533.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 754aa    MW: 82574.6 Da    PI: 6.4061
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026392533.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.75.3e-2081136156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL ++lgL+  qVk+WFqN+R+++k
  XP_026392533.1  81 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELGRELGLEPLQVKFWFQNKRTQMK 136
                     688999***********************************************999 PP
2START208.62.3e-652724932206
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     la  a++el+++++++ep+Wv  +    e++ +de++++f+++ +      ++ea+r s+ v+m++++lve+l+d + +W+  +     +a t+e
  XP_026392533.1 272 LAVGAMEELIRMVQLGEPLWVAGPdgatEILSEDEYMRTFPRGIGpkpfgLKTEASRQSADVIMNHMNLVEILMDAG-RWSSLFSsivsRAVTVE 365
                     78899*************************************999********************************.77777777777****** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     v+s+g      galq+m+ae+q++splvp R+++fvRy++q+++ +w++vdvS+++  +   s++v R++++pSg+li++++ng skv+wvehv+
  XP_026392533.1 366 VLSTGvagnfnGALQVMTAEFQVPSPLVPtRESLFVRYCKQHSDNTWAVVDVSLEHLHPS--SPPVSRCRRRPSGCLIQEMPNGCSKVVWVEHVE 458
                     ********************************************************9875..79******************************* PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++r +h+++rslv+s l +gak+w atl+rqce+
  XP_026392533.1 459 VDDRAVHSIYRSLVNSALGFGAKRWIATLDRQCER 493
                     *********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 754 aa     Download sequence    
MMIRNGKLEG FGSFTSSRHR LTHQPNMFDH TQHNPLDMMS DNDLARISNT VDEFDSKSGS  60
EYLEGGSGDD QADPTTQRAK KKRYHRHTQH QIQEMEAFFK ECPHPDDKQR KELGRELGLE  120
PLQVKFWFQN KRTQMKTQHE RHENTQLRME NDKLRAENMR YKEALSNASC PNCGGPTSLG  180
EMSFDEHHLR IENARLREEI DRILAIAAKY VGKPMGSSFP LLPPPIPSRS SLDLGVGIQG  240
GIRGDIVGGG GDLLRSLSGA LTEADKPVII ELAVGAMEEL IRMVQLGEPL WVAGPDGATE  300
ILSEDEYMRT FPRGIGPKPF GLKTEASRQS ADVIMNHMNL VEILMDAGRW SSLFSSIVSR  360
AVTVEVLSTG VAGNFNGALQ VMTAEFQVPS PLVPTRESLF VRYCKQHSDN TWAVVDVSLE  420
HLHPSSPPVS RCRRRPSGCL IQEMPNGCSK VVWVEHVEVD DRAVHSIYRS LVNSALGFGA  480
KRWIATLDRQ CERLASVMAS TTFLADPVIN NQEGRKSMLK LSERMVMSFC SGVSASTTHT  540
WTTLSGSGAE DVRVMTRKSV DDPGRPPGIV LNAATSFWLP VPPKRIFDFL RDENSRKEWD  600
ILSNGGDVQE MAHIANGRDP GNCVSLLRVH GVHSANSSPN NMLILQESCT NATGSFVIYA  660
PVDIAAMNAV LNGEDPDYVA LLPSGFAILP DGPTVHGGGT AAVESGGSLL TVAFQILVDS  720
IPTAKLSLGS VATVNSLISC TVERIKAAVN SDSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein