PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026390784.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 375aa MW: 42521.2 Da PI: 9.0467

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026390784.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	156.4	1.2e-48	1	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yL++kve+k+l++ e+ik++diyk++PwdLp + ++ke+yfF+ r++ky+++ r+nr+t sg+Wkatg dk+++s+ XP_026390784.1 1 MLPGFRFHPTDEELVGFYLRRKVEKKPLSI-EIIKQIDIYKYDPWDLP-MSPVGDKELYFFCIRERKYKNSVRPNRVTGSGFWKATGIDKPIYSA 93 579*************************.89***********.445689***********************************9 PP NAM 96 .............kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lv+y+g+a kg+ktdW+mhe+rl XP_026390784.1 94 vassgashtnnnnNKHCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 139 88888777665544445*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MLPGFRFHPT DEELVGFYLR RKVEKKPLSI EIIKQIDIYK YDPWDLPMSP VGDKELYFFC 60 IRERKYKNSV RPNRVTGSGF WKATGIDKPI YSAVASSGAS HTNNNNNKHC IGLKKSLVYY 120 RGSAGKGTKT DWMMHEFRLP PPVVAAAGTS SSAKLNTTIH HLNSKRISSS TSTHDQEAEI 180 WTLCRVFKRT VASYSITNKN KYPPTSHEYH KEITINGTAT NNNISSSTTT KSYSSPQQSF 240 SMESENWSSS STDQKFNYYT SEEYSTTSAQ VNSNNNQQER IINKTRPGGE VVTNNNQIHS 300 TERDSSYLFP GELMTDRITH HHQEAAVVLQ QSNNISNFQN LHGTRSNDIF FLDYGIWDDL 360 GSVISSDQAL LYGYI

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MLPGFRFHPT DEELVGFYLR RKVEKKPLSI EIIKQIDIYK YDPWDLPMSP VGDKELYFFC  60
IRERKYKNSV RPNRVTGSGF WKATGIDKPI YSAVASSGAS HTNNNNNKHC IGLKKSLVYY  120
RGSAGKGTKT DWMMHEFRLP PPVVAAAGTS SSAKLNTTIH HLNSKRISSS TSTHDQEAEI  180
WTLCRVFKRT VASYSITNKN KYPPTSHEYH KEITINGTAT NNNISSSTTT KSYSSPQQSF  240
SMESENWSSS STDQKFNYYT SEEYSTTSAQ VNSNNNQQER IINKTRPGGE VVTNNNQIHS  300
TERDSSYLFP GELMTDRITH HHQEAAVVLQ QSNNISNFQN LHGTRSNDIF FLDYGIWDDL  360
GSVISSDQAL LYGYI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	2e-78	NAC family protein