PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026390518.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SRS

Protein Properties

Length: 323aa MW: 35927.5 Da PI: 8.4103

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026390518.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	224.1	2.7e-69	95	252	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa......aeaaskrkrel.......kskkqs 84 gt+sCqdCGnqakkdC+h+RCRtCCksrgf C+thvkstWvpa++rrerqqql+a++++++++ + re ++ ++s XP_026390518.1 95 GGTKSCQDCGNQAKKDCVHMRCRTCCKSRGFPCQTHVKSTWVPASRRRERQQQLQALQEQQQQQLrgdhhsR------VRERenpkrlrENPNSS 183 5789***************************************************999999985544331......33332244443344556 PP DUF702 85 alsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +l + +++++++ + le+ ++P+e++s+avfrcvrvs+v++ +e++aYqtav+igGh+fkGiLydqG+++ XP_026390518.1 184 TLVAHRIPTHHT-SGLEVGNFPAELNSSAVFRCVRVSGVEETDEQYAYQTAVNIGGHLFKGILYDQGPDS 252 667777777765.5999999**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MLMDFLSQLI TRNEEISSSY NNNNNNSGNK GFELWQNHHH HQQLQRHYQL QQQQNAYSSS 60 ANLEVGPSRS TNASDESSSR ALTMMMRQSS VGDQGGTKSC QDCGNQAKKD CVHMRCRTCC 120 KSRGFPCQTH VKSTWVPASR RRERQQQLQA LQEQQQQQLR GDHHSRVRER ENPKRLRENP 180 NSSTLVAHRI PTHHTSGLEV GNFPAELNSS AVFRCVRVSG VEETDEQYAY QTAVNIGGHL 240 FKGILYDQGP DSHYVHGESS SGGAGGSGAM YQQRNLITDS TTTANTTTVT VAASASLLDS 300 SSLYPTPLNA FMAGTHFFPP PRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	1e-64	SRS family protein