PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026390517.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SRS

Protein Properties

Length: 338aa MW: 37402.9 Da PI: 8.2439

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026390517.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	224	2.9e-69	110	267	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa......aeaaskrkrel.......kskkqs 84 gt+sCqdCGnqakkdC+h+RCRtCCksrgf C+thvkstWvpa++rrerqqql+a++++++++ + re ++ ++s XP_026390517.1 110 GGTKSCQDCGNQAKKDCVHMRCRTCCKSRGFPCQTHVKSTWVPASRRRERQQQLQALQEQQQQQLrgdhhsR------VRERenpkrlrENPNSS 198 5789***************************************************999999985544331......33332244443344556 PP DUF702 85 alsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +l + +++++++ + le+ ++P+e++s+avfrcvrvs+v++ +e++aYqtav+igGh+fkGiLydqG+++ XP_026390517.1 199 TLVAHRIPTHHT-SGLEVGNFPAELNSSAVFRCVRVSGVEETDEQYAYQTAVNIGGHLFKGILYDQGPDS 267 667777777765.5999999**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MAGFSLGGGN NQNPSHEIHP DALFLYRNEE ISSSYNNNNN NSGNKGFELW QNHHHHQQLQ 60 RHYQLQQQQN AYSSSANLEV GPSRSTNASD ESSSRALTMM MRQSSVGDQG GTKSCQDCGN 120 QAKKDCVHMR CRTCCKSRGF PCQTHVKSTW VPASRRRERQ QQLQALQEQQ QQQLRGDHHS 180 RVRERENPKR LRENPNSSTL VAHRIPTHHT SGLEVGNFPA ELNSSAVFRC VRVSGVEETD 240 EQYAYQTAVN IGGHLFKGIL YDQGPDSHYV HGESSSGGAG GSGAMYQQRN LITDSTTTAN 300 TTTVTVAASA SLLDSSSLYP TPLNAFMAGT HFFPPPRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	3e-64	SRS family protein