PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026390447.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 431aa MW: 48322.6 Da PI: 6.9253

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026390447.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.7	3.5e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+ ++ + G+g +W + ++++g++R++k+c++rw++yl XP_026390447.1 14 RGPWSPEEDSKLKSYIDENGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	38.2	3.2e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ ++ G++ W+ Ia+ ++ gRt++++k++w++ XP_026390447.1 69 GGFSEEEDNIICNLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MGRAPCCDKA NVKRGPWSPE EDSKLKSYID ENGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC NLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRKEHQSRRV NAHLKQEMMK KAGNDVHFMM NTTADNNNKT NGTTHQNHPQ NLYFPQPAPT 180 AAPQLDSALN DHTSIRKLLI KLGGRFSDIQ DHHLQQGLDN NKLKNISFYT PTQDIPSTQQ 240 VYGGHDPHNP SMDWFSSSMN YSTINTNNNS SCADELLLNN SYDIVDDDGM NMHDMLVSDD 300 GLNSCFPIDH EHLGDDDHSM PALCRNTKME SSSVIDHYDQ AGSSSTELLY GSSSMAMENE 360 SSSSTPGTHI DITKPSSSGG NGNSWVHVDR HMRPFMYPNT IPTVNTTTGF GSSQQQPPPQ 420 QQRVLQEYGL N

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MGRAPCCDKA NVKRGPWSPE EDSKLKSYID ENGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC NLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRKEHQSRRV NAHLKQEMMK KAGNDVHFMM NTTADNNNKT NGTTHQNHPQ NLYFPQPAPT  180
AAPQLDSALN DHTSIRKLLI KLGGRFSDIQ DHHLQQGLDN NKLKNISFYT PTQDIPSTQQ  240
VYGGHDPHNP SMDWFSSSMN YSTINTNNNS SCADELLLNN SYDIVDDDGM NMHDMLVSDD  300
GLNSCFPIDH EHLGDDDHSM PALCRNTKME SSSVIDHYDQ AGSSSTELLY GSSSMAMENE  360
SSSSTPGTHI DITKPSSSGG NGNSWVHVDR HMRPFMYPNT IPTVNTTTGF GSSQQQPPPQ  420
QQRVLQEYGL N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65790.1	8e-81	MYB family protein