PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026389693.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 255aa MW: 28372.7 Da PI: 6.957 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.3 | 1.1e-10 | 50 | 93 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 W+ e d+ + +a + ++ g +W++Ia ++ g+tl+++ks++ XP_026389693.1 50 TWSREQDKAFENALAIHPEGtenRWEKIAVEVT-GKTLEDVKSHY 93 7*******************************9.**********9 PP | |||||||
2 | Myb_DNA-binding | 45.2 | 2.1e-14 | 158 | 202 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +++G+g+W++I+r +Rt+ q+ s+ qky XP_026389693.1 158 AWTEEEHRLFLLGLEKYGKGDWRSISRNYVVTRTPTQVASHAQKY 202 6*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MFLSGFERPS SEFFKVSIYR KPNWIILCSC NILVVSLMQM TADETSESST WSREQDKAFE 60 NALAIHPEGT ENRWEKIAVE VTGKTLEDVK SHYDILVEDI SGIEAGLVPV PCYVSSPEGS 120 AEHVGEGGAS RKDENSQGNS NHKGKASRLD QERRKGIAWT EEEHRLFLLG LEKYGKGDWR 180 SISRNYVVTR TPTQVASHAQ KYFIRLSNSM NKDRRRSSIH DITGVGDAEN ISTTSRGPIT 240 GQANGHFAAG PRAVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 1e-91 | MYB family protein |