PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026389688.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 289aa MW: 28633.8 Da PI: 9.8649

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026389688.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119.1	5.3e-37	28	108	2	81
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssss 81 a+kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl++a+p+i+++tgt++++a+++ ++ss XP_026389688.1 28 AVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRAAEPSIIAATGTGTTPANFSsISVSSARG 108 789*****************************************************************9887322222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MSDGGTSNNN GALTDPQRQP QNGSGALAVK KPPAKDRHSK VDGRGRRIRM PIICAARVFQ 60 LTRELGHKSD GQTIEWLLRA AEPSIIAATG TGTTPANFSS ISVSSARGGG GGSLSCSTTS 120 SSIDQKPAGQ IMSPAPFLLG KRLRTDGSDD ADGGGGDGNS GVGPGGGGGG GIGGVGGGGG 180 FWAVPARPDF GQVWSFSGGP EMVLPMPMAV TPMPMSMAMA GSSQQLISGR FLQQSIGGGA 240 GGGGGGGEGG SAASGAGRMG NYLTQGHLNL LASLSGNSPN SVRREDEPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	3e-58	TCP family protein