PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026388784.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 953aa MW: 104905 Da PI: 6.4273

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026388784.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.1	8e-19	340	440	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k+l+ sd+++ grlvlpk +ae++ ++++e++ ++++d +g+ W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_026388784.1 340 FEKILSASDAGRIGRLVLPKACAEAYfpPISQPEGVPIRIQDAKGKDWLFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PEGK 432 99************************677779999***********99899999999.*******************987.7777 PP .EEEEE-S CS B3 92 lvvkvfrk 99 lv++++++ XP_026388784.1 433 LVMGFRKA 440 88777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 953 aa Download sequence
MESMKVCANV SCTSSSRNRN DTSTSSTSTT EWRKGWDLRS GGSAVLCHNC GFAYEQSVYC 60 EAFHTKESGW RECISCGKRL HCGCIASKSL FELLDDGGVE CISCTKNLKY SSMQSHENQN 120 GFATTLINNA GEIRSASTED RVDGPSINMG KLLQMGKNIE VEGQISLLEK LRNGSNGQIK 180 REQVPLGEGW STVFSNLNQV PVGSCEIIKQ VNGKEMLGVK NLDESLSQTC LSINVGASLG 240 NTNLALTLSG SAVEGRDLST FPSSYPHGQR SRNLLPRPPR VGLAIGSEGT KDAVPQVRVA 300 RPPVEGRGRN QLLPRYWPRI TEEELQQISG DSNSTIVPLF EKILSASDAG RIGRLVLPKA 360 CAEAYFPPIS QPEGVPIRIQ DAKGKDWLFQ FRFWPNNNSR MYVLEGVTPC IQSMQLQAGD 420 TVTFSRIDPE GKLVMGFRKA SNSVNLQDSQ IAAIASGAVS NASFFPDVIE NLPVASGYAG 480 LLQSLKGSTD PHLNAMSEHI RIGGDFSWHK TEKQGKRTNE GMQLQHLLLP EKKRSRNIGS 540 KSKRLLIDSE SALELKLTWE DAQDLLRPPP SIKPSIVIIE DHEFEEYEEP PVFGKRTIFT 600 SGAAGVQAQW AQCDNCSKWR RLPIDVLVPP KWTCADNVWD TKRCTCSGPD ELTPRELEHL 660 LRLDMEFKMQ RMSTSDKERQ EHEPSGLDTL ATAAFFGNKN GDDSTVAPSV ATTTRHPRHR 720 PGCTCIVCIQ PPSGKGPKHK PTCTCNVCMT VKRRFKTLML RKKKRQSEKE AEIAQRNKCN 780 VESSRDEIEV ESATRGIVFP VGVSENSEAC QAIESESASE SRTYIEKDLT ENVKGGQLDL 840 NSDPVHRSEE LQAVAATAAV MSERVSMVSL LQEASLPLET YLKQNGLRSL VHEQQQLQIS 900 SPNSNAALPQ EANVGESDEQ PPHDDQDASI AFEVPEREKG ADKGDDMLDP AKK

Sequence ? help Back to Top

Protein Sequence Length: 953 aa Download sequence

MESMKVCANV SCTSSSRNRN DTSTSSTSTT EWRKGWDLRS GGSAVLCHNC GFAYEQSVYC  60
EAFHTKESGW RECISCGKRL HCGCIASKSL FELLDDGGVE CISCTKNLKY SSMQSHENQN  120
GFATTLINNA GEIRSASTED RVDGPSINMG KLLQMGKNIE VEGQISLLEK LRNGSNGQIK  180
REQVPLGEGW STVFSNLNQV PVGSCEIIKQ VNGKEMLGVK NLDESLSQTC LSINVGASLG  240
NTNLALTLSG SAVEGRDLST FPSSYPHGQR SRNLLPRPPR VGLAIGSEGT KDAVPQVRVA  300
RPPVEGRGRN QLLPRYWPRI TEEELQQISG DSNSTIVPLF EKILSASDAG RIGRLVLPKA  360
CAEAYFPPIS QPEGVPIRIQ DAKGKDWLFQ FRFWPNNNSR MYVLEGVTPC IQSMQLQAGD  420
TVTFSRIDPE GKLVMGFRKA SNSVNLQDSQ IAAIASGAVS NASFFPDVIE NLPVASGYAG  480
LLQSLKGSTD PHLNAMSEHI RIGGDFSWHK TEKQGKRTNE GMQLQHLLLP EKKRSRNIGS  540
KSKRLLIDSE SALELKLTWE DAQDLLRPPP SIKPSIVIIE DHEFEEYEEP PVFGKRTIFT  600
SGAAGVQAQW AQCDNCSKWR RLPIDVLVPP KWTCADNVWD TKRCTCSGPD ELTPRELEHL  660
LRLDMEFKMQ RMSTSDKERQ EHEPSGLDTL ATAAFFGNKN GDDSTVAPSV ATTTRHPRHR  720
PGCTCIVCIQ PPSGKGPKHK PTCTCNVCMT VKRRFKTLML RKKKRQSEKE AEIAQRNKCN  780
VESSRDEIEV ESATRGIVFP VGVSENSEAC QAIESESASE SRTYIEKDLT ENVKGGQLDL  840
NSDPVHRSEE LQAVAATAAV MSERVSMVSL LQEASLPLET YLKQNGLRSL VHEQQQLQIS  900
SPNSNAALPQ EANVGESDEQ PPHDDQDASI AFEVPEREKG ADKGDDMLDP AKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	752	763	KRRFKTLMLRKK
2	752	765	KRRFKTLMLRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein